RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 IL13RA2Q14627 380 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 ABLIM2Q6H8Q1 611 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 SLAMF9Q96A28 289 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 PAPOLGQ9BWT3 736 aaKnown RBP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 STRAPQ9Y3F4 350 aaKnown RBP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 TNRC6BQ9UPQ9 1833 aaKnown RBP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 HLA-HP01893 362 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 FUT3P21217 361 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 OR8B8Q15620 311 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 TAAR9Q96RI9 348 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 C20orf24Q9BUV8 137 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 HES7Q9BYE0 225 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 RGCCQ9H4X1 137 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 SLC7A10Q9NS82 523 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 CCDC163A0A0D9SF12 145 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 C5orf52A6NGY3 159 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 UBE2CO00762 179 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 PPYP01298 95 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.32
CSDC2-201ENST00000306149 BCL3P20749 454 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 PMELP40967 661 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 GLP1RP43220 463 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 CAMLGP49069 296 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 CYB561P49447 251 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.32
CSDC2-201ENST00000306149 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 LGI3Q8N145 548 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.32
CSDC2-201ENST00000306149 C19orf12Q9NSK7 152 aa13.02□□□□□ -0.32
CSDC2-201ENST00000306149 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.32
CSDC2-201ENST00000306149 PCSK5Q92824 1860 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 MED13Q9UHV7 2174 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 NKX2-6A6NCS4 301 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 NXPH3O95157 252 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 PRH1P02810 166 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 SMIM6P0DI80 62 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 AGAP20933 346 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 UCP3P55916 312 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 PCBD1P61457 104 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 ARF1P84077 181 aaKnown RBP13.02□□□□□ -0.33
CSDC2-201ENST00000306149 TGIF1Q15583 401 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 CT55Q8WUE5 264 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 SYT3Q9BQG1 590 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 PARPBPQ9NWS1 579 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 IL36GQ9NZH8 169 aa13.02□□□□□ -0.33
CSDC2-201ENST00000306149 C7orf77A4D0Y5 90 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 MRPL33O75394 65 aaKnown RBP13.01□□□□□ -0.33
CSDC2-201ENST00000306149 S100A8P05109 93 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 DAOP14920 347 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 OMGP23515 440 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 HAAOP46952 286 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 DUSP3P51452 185 aaPredicted RBP13.01□□□□□ -0.33
CSDC2-201ENST00000306149 GPM6AP51674 278 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 TCEAL6Q6IPX3 200 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 EXTL1Q92935 676 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 TCEAL3Q969E4 200 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 PRRG4Q9BZD6 226 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
CSDC2-201ENST00000306149 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 CALHM2Q9HA72 323 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF503-AS2A6NEH8 195 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 FAM24AA6NFZ4 105 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 SCTP09683 121 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF44P15621 663 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 GNRHRP30968 328 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 CLINT1Q14677 625 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF561Q8N587 486 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 PSMF1Q92530 271 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 SPACA1Q9HBV2 294 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 LRFN1Q9P244 771 aa13.01□□□□□ -0.33
CSDC2-201ENST00000306149 C3orf85A0A1B0GTC6 90 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 MPPED1O15442 326 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 CYTIPO60759 359 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 GFRA1P56159 465 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 FOXO1Q12778 655 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 TSC22D1Q15714 1073 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 DCAF12Q5T6F0 453 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF100Q8IYN0 542 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 RSRP1Q9BUV0 290 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 GLAP06280 429 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 SNRNP70P08621 437 aaKnown RBP13□□□□□ -0.33
CSDC2-201ENST00000306149 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
CSDC2-201ENST00000306149 RHEBQ15382 184 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 IGFBP7Q16270 282 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 EIF2S3LQ2VIR3 472 aaKnown RBP13□□□□□ -0.33
CSDC2-201ENST00000306149 WDR5BQ86VZ2 330 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 LURAP1LQ8IV03 231 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 TUSC5Q8IXB3 177 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 CCDC71LQ8N9Z2 235 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms