RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 HOXC13P31276 330 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 ADAMTSL4Q6UY14 1074 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 MRPL16Q9NX20 251 aaKnown RBP11.97□□□□□ -0.49
TRIM56-201ENST00000306085 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 GFRA1P56159 465 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 SLC35B1P78383 322 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 ROM1Q03395 351 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 DHRS2Q13268 280 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 FZD2Q14332 565 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 HTR3DQ70Z44 454 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 FOXJ3Q9UPW0 622 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 CDX2Q99626 313 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-201ENST00000306085 CDCA4Q9BXL8 241 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 ID1P41134 155 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 TRAF4Q9BUZ4 470 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-201ENST00000306085 OTX1P32242 354 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-201ENST00000306085 IL4P05112 153 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 COL19A1Q14993 1142 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 VWA2Q5GFL6 755 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM207Q6UWW9 146 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 CHRNA10Q9GZZ6 450 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 PLPP1O14494 284 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 NGFP01138 241 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 EMDP50402 254 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 FBXL17Q9UF56 701 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-201ENST00000306085 H3BMH7 237 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 TAPBPO15533 448 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 MRPS21P82921 87 aaKnown RBP11.96□□□□□ -0.49
TRIM56-201ENST00000306085 OR1F12Q8NHA8 337 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM204Q9BSN7 226 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 CDK5R1Q15078 307 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-201ENST00000306085 FAM222BQ8WU58 562 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
TRIM56-201ENST00000306085 PGA4P0DJD7 388 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 PGA5P0DJD9 388 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 ATF1P18846 271 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 LEMD1Q68G75 181 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 ABHD17CQ6PCB6 329 aa11.96□□□□□ -0.49
TRIM56-201ENST00000306085 DNAJB12Q9NXW2 375 aaKnown RBP11.96□□□□□ -0.49
TRIM56-201ENST00000306085 OR4A8P0C604 315 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 SMIM18P0DKX4 95 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 PARM1Q6UWI2 310 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 C9orf170A2RU37 121 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 PRKNO60260 465 aaPredicted RBP11.96□□□□□ -0.5
TRIM56-201ENST00000306085 TSPAN12O95859 305 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 MFAP4P55083 255 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 PTRH1Q86Y79 214 aaKnown RBP11.96□□□□□ -0.5
TRIM56-201ENST00000306085 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.5
TRIM56-201ENST00000306085 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 SLC25A17O43808 307 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 SCD5Q86SK9 330 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 SARAFQ96BY9 339 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 PDLIM5Q96HC4 596 aaKnown RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 SHISA7A6NL88 538 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 IDSB3KWA1 339 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ZDHHC22Q8N966 263 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 EAF1Q96JC9 268 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ADAMTS5Q9UNA0 930 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 UBTD2Q8WUN7 234 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ST3GAL2Q16842 350 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 CLEC18BQ6UXF7 455 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 RFLNAQ6ZTI6 216 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ERASQ7Z444 233 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 MUC20Q8N307 709 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ARRDC1Q8N5I2 433 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 C9orf172C9J069 976 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 PTGESO14684 152 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 RPS4XP62701 263 aaKnown RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 TM4SF1P30408 202 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 BAHD1Q8TBE0 780 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-201ENST00000306085 CES1P1Q9UKY3 287 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
TRIM56-201ENST00000306085 HSPB2A8KAH6 182 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 HSPB2Q16082 182 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 LDLRAD3Q86YD5 345 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
TRIM56-201ENST00000306085 SYT8Q8NBV8 401 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 SDF2Q99470 211 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 WNT5BQ9H1J7 359 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 LRP12Q9Y561 859 aa11.94□□□□□ -0.5
TRIM56-201ENST00000306085 MPC2O95563 127 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms