RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 LALBAP00709 142 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 TAS2R43P59537 309 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 AESQ08117 197 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 RSU1Q15404 277 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 YIF1BQ5BJH7 314 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 STX19Q8N4C7 294 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 ZNF485Q8NCK3 441 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 CORO2AQ92828 525 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 CITED1Q99966 193 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 TMEM133Q9H2Q1 129 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 TAS2R3Q9NYW6 316 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 PSORS1C1Q9UIG5 152 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 XPNPEP2O43895 674 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 PAX6P26367 422 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 PROK1P58294 105 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 LY6EQ16553 131 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 KRBOX4Q5JUW0 171 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 OR52W1Q6IF63 320 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 DSCAML1Q8TD84 2053 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 NR1H4Q96RI1 486 aaPredicted RBP21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 CKLFQ9UBR5 152 aa21.42■■□□□ 1.02
CDKN2A-201ENST00000304494 IGHV2-26A0A0B4J1V2 119 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 TRBV5-5A0A0J9YX44 114 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 BDKRB2P30411 391 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 ZNF93P35789 620 aaPredicted RBP21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 PTGFRP43088 359 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 GLIPR1P48060 266 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 Q499Y3 187 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 DDI2Q5TDH0 399 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 MINOS1Q5TGZ0 78 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 LAIR2Q6ISS4 152 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 ASCL4Q6XD76 172 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 AHSA2Q719I0 299 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 BPIFB6Q8NFQ5 453 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 OR51T1Q8NGJ9 327 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 TFAP2CQ92754 450 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 CLEC7AQ9BXN2 247 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 ABCB10Q9NRK6 738 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 MINOS1-NBL1R4GNA1 71 aa21.41■■□□□ 1.02
CDKN2A-201ENST00000304494 ODAMA1E959 279 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 H0YJX3 145 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 MYL12BO14950 172 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 SLC34A1Q06495 639 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 SRSF4Q08170 494 aaKnown RBP21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 RIPK1Q13546 671 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 IL13RA2Q14627 380 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 ZFP41Q8N8Y5 198 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 Q8NFD4 153 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 OR13C5Q8NGS8 318 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 PGLYRP3Q96LB9 341 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 S100A13Q99584 98 aa21.4■■□□□ 1.02
CDKN2A-201ENST00000304494 TRRAPQ9Y4A5 3859 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 OR3A4PP47883 348 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 ATXN7L3Q14CW9 347 aaPredicted RBP21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 FAM189A2Q15884 450 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 SSX2Q16385 188 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 SLC35E4Q6ICL7 350 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 HEPN1Q6WQI6 88 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 RTN4RL2Q86UN3 420 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 DYNAPQ8N1N2 210 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 DTX3Q8N9I9 347 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 OR4C13Q8NGP0 309 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 PIFOQ8TCI5 191 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 COQ2Q96H96 371 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 CDCA4Q9BXL8 241 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 METTL9Q9H1A3 318 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 RANBP3Q9H6Z4 567 aaPredicted RBP21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 PAK1IP1Q9NWT1 392 aaPredicted RBP21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 IL36GQ9NZH8 169 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 OR6C3Q9NZP0 311 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 FBLN5Q9UBX5 448 aa21.39■■□□□ 1.01
CDKN2A-201ENST00000304494 GPX5O75715 221 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 IGFBP3P17936 291 aaPredicted RBP21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 CDK2P24941 298 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 GABRA5P31644 462 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 WNT4P56705 351 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 RPS11P62280 158 aaKnown RBP eCLIP21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 PAN3Q58A45 887 aaKnown RBP21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 PRAMEF5Q5TYX0 476 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 ING4Q9UNL4 249 aa21.38■■□□□ 1.01
CDKN2A-201ENST00000304494 TIMM23O14925 209 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 HTR3BO95264 441 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 CSTBP04080 98 aaKnown RBP21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 C21orf33P30042 268 aaPredicted RBP21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 PLA1AQ53H76 456 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 ABHD12Q8N2K0 398 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 OR4D6Q8NGJ1 314 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 OR10K1Q8NGX5 313 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 NDNFQ8TB73 568 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 BARHL1Q9BZE3 327 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 NPFFR1Q9GZQ6 430 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 PCDHB16Q9NRJ7 776 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 FKBP14Q9NWM8 211 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 ING3Q9NXR8 418 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 NKX1-2Q9UD57 310 aaPredicted RBP21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 PITPNC1Q9UKF7 332 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 ERGIC3Q9Y282 383 aa21.37■■□□□ 1.01
CDKN2A-201ENST00000304494 ZNF729A6NN14 1252 aaPredicted RBP21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 HSPB6O14558 160 aa21.36■■□□□ 1.01
CDKN2A-201ENST00000304494 ZNF780AO75290 641 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms