RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZNF205O95201 554 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 PNPP00491 289 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 GAPTQ8N292 157 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 TMEM52Q8NDY8 209 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 DTX4Q9Y2E6 619 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
PRKCB-201ENST00000303531 CHST1O43916 411 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 KIR2DL1P43626 348 aaPredicted RBP12.27□□□□□ -0.45
PRKCB-201ENST00000303531 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 PMS2P11Q13670 270 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 CENPVL1A0A0U1RR11 272 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 TMIGD3P0DMS9 266 aaPredicted RBP12.27□□□□□ -0.45
PRKCB-201ENST00000303531 CCL4P13236 92 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 SOX8P57073 446 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 ZNF154Q13106 437 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
PRKCB-201ENST00000303531 AWAT1Q58HT5 328 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 HES3Q5TGS1 186 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 SH2D2AQ9NP31 389 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 R4GN57 208 aa12.27□□□□□ -0.45
PRKCB-201ENST00000303531 FAM90A27PA6NNH2 459 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 HLA-GP17693 338 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ADAD2Q8NCV1 583 aaKnown RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 RSRP1Q9BUV0 290 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 MAGEA5P43359 124 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ERVS71-1P61550 626 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 CDRT15L2A8MXV6 281 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 HSD17B10Q99714 261 aaKnown RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 TMEM218A2RU14 115 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 PPYP01298 95 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 SP1P08047 785 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 CCL3P10147 92 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 C9orf40Q8IXQ3 194 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 OR6S1Q8NH40 331 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 OR4S2Q8NH73 311 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 RNF133Q8WVZ7 376 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 R3HDM4Q96D70 268 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ARG1P05089 322 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 EFNB2P52799 333 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 GAB4Q2WGN9 574 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 CES1P1Q9UKY3 287 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 GATCO43716 136 aaKnown RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 VSIG8P0DPA2 414 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 G0S2P27469 103 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ZPLD1Q8TCW7 415 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 OR2H1Q9GZK4 316 aa12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ZNF107Q9UII5 783 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-201ENST00000303531 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 SCN3AQ9NY46 2000 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 ST6GALNAC2Q9UJ37 374 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 MBPP02686 304 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 CCL28Q9NRJ3 127 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 J3QR89 54 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 CDIPTO14735 213 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 MMP7P09237 267 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 ORM2P19652 201 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 APC2O95996 2303 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 OOEPA6NGQ2 149 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 HAND1O96004 215 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 PMELP40967 661 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 AMTP48728 403 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 VDAC1P21796 283 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 PRRX1P54821 245 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 NAT8Q9UHE5 227 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 MGAT2Q10469 447 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 ABHD3Q8WU67 409 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
PRKCB-201ENST00000303531 MRPS18AQ9NVS2 196 aaKnown RBP12.25□□□□□ -0.45
PRKCB-201ENST00000303531 GOSR1O95249 250 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 IL9P15248 144 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 ACAA2P42765 397 aaKnown RBP12.24□□□□□ -0.45
PRKCB-201ENST00000303531 MRPS11P82912 194 aaKnown RBP12.24□□□□□ -0.45
PRKCB-201ENST00000303531 OR2M7Q8NG81 312 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 AMDHD2Q9Y303 409 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 FAM219AQ8IW50 185 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 GPR87Q9BY21 358 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 ANKRD34CP0C6C1 535 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 ADAT3Q96EY9 351 aaPredicted RBP12.24□□□□□ -0.45
PRKCB-201ENST00000303531 MANBALQ9NQG1 85 aa12.24□□□□□ -0.45
PRKCB-201ENST00000303531 PCDHGA9Q9Y5G4 932 aaKnown RBP12.24□□□□□ -0.45
PRKCB-201ENST00000303531 RPS4Y1P22090 263 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms