RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 AKR1E2Q96JD6 320 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 PAPOLGQ9BWT3 736 aaKnown RBP11.13□□□□□ -0.63
HIF3A-204ENST00000300862 CALHM2Q9HA72 323 aa11.13□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 FAM166BA8MTA8 275 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 PHF1O43189 567 aaPredicted RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 CYTIPO60759 359 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 PDCD6O75340 191 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 CST4P01036 141 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 S100A9P06702 114 aaKnown RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 AADACP22760 399 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 ASCL1P50553 236 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 ARF1P84077 181 aaKnown RBP11.12□□□□□ -0.63
HIF3A-204ENST00000300862 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 EDARADDQ8WWZ3 215 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 SIGLEC12Q96PQ1 595 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 IL36RNQ9UBH0 155 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF503-AS2A6NEH8 195 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 DUSP1P28562 367 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 SULT1A2P50226 295 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 PCBD1P61457 104 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 ZXDAP98168 799 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 OR8B8Q15620 311 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 TSC22D1Q15714 1073 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 RIPPLY2Q5TAB7 128 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 Q6ZRG5 221 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 SLAMF9Q96A28 289 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 LOC400499M0QZD8 3231 aa11.12□□□□□ -0.63
HIF3A-204ENST00000300862 A6NLC8 198 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 TAAR5O14804 337 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 SERPINA7P05543 415 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 FHITP49789 147 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 SSPNQ14714 243 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 Q3ZCU0 254 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 C1orf210Q8IVY1 113 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 CPNE4Q96A23 557 aaPredicted RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 TP53RKQ96S44 253 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 FGF23Q9GZV9 251 aaPredicted RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 PLA2G3Q9NZ20 509 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 MIOXQ9UGB7 285 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 TECTAO75443 2155 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 TRBV23-1A0A0A0MS06 115 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 C5orf49A4QMS7 147 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 B4E171 279 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 IGHEP01854 428 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 BCL3P20749 454 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 GPM6AP51674 278 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 C3AR1Q16581 482 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 EIF5AL1Q6IS14 154 aaKnown RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 PRRG4Q9BZD6 226 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
HIF3A-204ENST00000300862 METTL1Q9UBP6 276 aaKnown RBP11.11□□□□□ -0.63
HIF3A-204ENST00000300862 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 C1QL1O75973 258 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 OR8U8P0C7N1 319 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 FUT3P21217 361 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 EIF5AP63241 154 aaKnown RBP11.1□□□□□ -0.63
HIF3A-204ENST00000300862 NHLH2Q02577 135 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 RNF212Q495C1 297 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 MSI2Q96DH6 328 aaKnown RBP11.1□□□□□ -0.63
HIF3A-204ENST00000300862 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 BCL2L14Q9BZR8 327 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 OR51M1Q9H341 326 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 RGCCQ9H4X1 137 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 PARP11Q9NR21 331 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 ZDHHC8Q9ULC8 765 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 SLC33A1O00400 549 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-204ENST00000300862 NME2P1O60361 137 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 CLN5O75503 358 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 NEURL1O76050 574 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 JTBO76095 146 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 IGHV2-70P01814 119 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 HERV-K104P61576 105 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 LINC00696Q6ZRV3 163 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF100Q8IYN0 542 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 SUMF1Q8NBK3 374 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms