RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GSK3AP49840 483 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 BIVMQ86UB2 503 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 TBC1D26Q86UD7 250 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 OR2M3Q8NG83 312 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
CASC4-201ENST00000299957 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 ZNF880Q6PDB4 577 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 LINC00518Q8N0U6 118 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 TP53TG5Q9Y2B4 290 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 PDCD6O75340 191 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
CASC4-201ENST00000299957 CD1AP06126 327 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 PAQR4Q8N4S7 273 aaPredicted RBP11.62□□□□□ -0.55
CASC4-201ENST00000299957 SLC25A22Q9H936 323 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
CASC4-201ENST00000299957 CYTIPO60759 359 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TMEM127O75204 238 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 SLC25A4P12235 298 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 CALCRP30988 508 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 NPBWR2P48146 333 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 IGFBP7Q16270 282 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 LHFPL2Q6ZUX7 228 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 MALSU1Q96EH3 234 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TCEAL7Q9BRU2 100 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 IGKV1D-8A0A087WSZ0 117 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 DVL1O14640 695 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 PPYP01298 95 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 SUMO3P55854 103 aaPredicted RBP11.61□□□□□ -0.55
CASC4-201ENST00000299957 DSCR4P56555 118 aaPredicted RBP11.61□□□□□ -0.55
CASC4-201ENST00000299957 HBG1P69891 147 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 HBG2P69892 147 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 ZNF92Q03936 586 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 PRDX4Q13162 271 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 HMGN3Q15651 99 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 HFEQ30201 348 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 KIR2DS1A0A191URI9 304 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TSTD3H0UI37 97 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 H0YL77 283 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 H7BYZ3 331 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 PGA4P0DJD7 388 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 PGA3P0DJD8 388 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 KIR2DS4P43632 304 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 CCL11P51671 97 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 DMWDQ09019 674 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 KIR2DS1Q14954 304 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 EXT1Q16394 746 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TRIOO75962 3097 aa11.61□□□□□ -0.55
CASC4-201ENST00000299957 TIMM8AO60220 97 aaPredicted RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 SCTP09683 121 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ZNF345Q14585 488 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 TMPRSS7Q7RTY8 843 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 SPEM1Q8N4L4 309 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 BSCL2Q96G97 398 aaPredicted RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 PLEKHA3Q9HB20 300 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.55
CASC4-201ENST00000299957 IGHV5-10-1A0A0J9YXX1 117 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 CLEC18AA5D8T8 446 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 FUT6P51993 359 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ZNF343Q6P1L6 599 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 CLEC18CQ8NCF0 446 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 SNX22Q96L94 193 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 GAR1Q9NY12 217 aaKnown RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 OSGIN2Q9Y236 505 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ATRXP46100 2492 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 HBE1P02100 147 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 OPN1MWP04001 364 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 BCL3P20749 454 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ACER2Q5QJU3 275 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 SPSB1Q96BD6 273 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ADGRG7Q96K78 797 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 RSG1Q9BU20 258 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 PLEKHF2Q9H8W4 249 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 RCC2Q9P258 522 aaKnown RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 SELEP16581 610 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ZNF708P17019 499 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 FSTP19883 344 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 RAB5AP20339 215 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 GCH1P30793 250 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 TUSC5Q8IXB3 177 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
CASC4-201ENST00000299957 SPSB2Q99619 263 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms