RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 DHRS3O75911 302 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 GCGP01275 180 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 CTSDP07339 412 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 SYNGR2O43760 224 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 SMPD2O60906 423 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 ADPRHP54922 357 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF273Q14593 569 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 FAM74A7A6NL05 159 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 H0YIG0 161 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 M0R3E3 92 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 SPRY3O43610 288 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 GNG3P63215 75 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 RIGQ13278 110 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 SGK494Q96LW2 274 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
SCN3B-201ENST00000299333 HDGFL3Q9Y3E1 203 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 MMP9P14780 707 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 COL8A1P27658 744 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 OR4D9Q8NGE8 314 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 PGA4P0DJD7 388 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 PGA5P0DJD9 388 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 PGFP49763 221 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 DPTQ07507 201 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 CD226Q15762 336 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 CA10Q9NS85 328 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 TRGC2P03986 189 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF141Q15928 474 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
SCN3B-201ENST00000299333 SSMEM1Q8WWF3 244 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 NEU3Q9UQ49 428 aa13.18□□□□□ -0.3
SCN3B-201ENST00000299333 KCNAB3O43448 404 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 FAM74A3Q4VXF1 159 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 SLC35E3Q7Z769 313 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 MRPL24Q96A35 216 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 PKIBQ9C010 78 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 IGHV3-13P01766 116 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 PWWP2BQ6NUJ5 590 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 OR4B1Q8NGF8 309 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 FAM216AQ8WUB2 273 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 PDCD6O75340 191 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 HIST1H1EP10412 219 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 RPL30P62888 115 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF506Q5JVG8 444 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 C17orf99Q6UX52 265 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 MRGPRGQ86SM5 289 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 SLC17A3O00476 420 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 IL2RAP01589 272 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 Q8IYB0 196 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 NPEPL1Q8NDH3 523 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 IGSF23A1L1A6 192 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 RCC1P18754 421 aaPredicted RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 CA6P23280 308 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 RAE1P78406 368 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF841Q6ZN19 808 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 ADAD2Q8NCV1 583 aaKnown RBP13.17□□□□□ -0.3
SCN3B-201ENST00000299333 OR2Z1Q8NG97 314 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
SCN3B-201ENST00000299333 BRS3P32247 399 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 PAFAH1B2P68402 229 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 GAB4Q2WGN9 574 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 OVCH2Q7RTZ1 564 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 FAM3BP58499 235 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 NIT1Q86X76 327 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 C6orf106Q9H6K1 298 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-201ENST00000299333 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 MYBPHQ13203 477 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 ASB16Q96NS5 453 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 WDR13Q9H1Z4 485 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 TJP1Q07157 1748 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 ASCL4Q6XD76 172 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 NRIP2Q9BQI9 281 aa13.16□□□□□ -0.3
SCN3B-201ENST00000299333 LOC389332A0A1B0GUA5 103 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms