RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 DSPP15924 2871 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 LRP5LA4QPB2 252 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 G3V3Q6 166 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 TRAPPC2LH3BP13 241 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 TEX46H3BTG2 121 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 J3QT63 122 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 ARPC1BO15143 372 aaKnown RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 CRYAAP02489 173 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 RNASE10Q5GAN6 216 aaKnown RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 NKAPLQ5M9Q1 402 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 OR10AD1Q8NGE0 317 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 EMG1Q92979 244 aaKnown RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 NKX6-2Q9C056 277 aaPredicted RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 TMEM100Q9NV29 134 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 SLC2A8Q9NY64 477 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 F8VVB4 439 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 F8VWA3 439 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 PRAF2O60831 178 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 RLN2P04090 185 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 AMY2AP04746 511 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 GCH1P30793 250 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 NKX6-1P78426 367 aaPredicted RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 PAN3Q58A45 887 aaKnown RBP13.24□□□□□ -0.29
LSM6-201ENST00000296581 BPIFB2Q8N4F0 458 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 GINS4Q9BRT9 223 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 DNTTIP1Q9H147 329 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 PLEKHA6Q9Y2H5 1048 aa13.24□□□□□ -0.29
LSM6-201ENST00000296581 POLEQ07864 2286 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 A0A1B0GWJ7 208 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 DISC1C4P0D8 188 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 PDCD6O75340 191 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 PTAFRP25105 342 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 PMELP40967 661 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 FABP6P51161 128 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 DEFA5Q01523 94 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 OR8G1Q15617 311 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 ALKBH2Q6NS38 261 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 COQ8AQ8NI60 647 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SLC6A7Q99884 636 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SULT4A1Q9BR01 284 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 FAAP24Q9BTP7 215 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SPTA1P02549 2419 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 A0A1B0GUH1 482 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SIGLEC5O15389 551 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 MLNRO43193 412 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 TIMM8AO60220 97 aaPredicted RBP13.23□□□□□ -0.29
LSM6-201ENST00000296581 SULT1A3P0DMM9 295 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SULT1A4P0DMN0 295 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 C4BPBP20851 252 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 HRH1P35367 487 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 GLRXP35754 106 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 IGFBP7Q16270 282 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 ACTBL2Q562R1 376 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 OR4K15Q8NH41 348 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
LSM6-201ENST00000296581 PLK3Q9H4B4 646 aa13.23□□□□□ -0.29
LSM6-201ENST00000296581 TMEM82A0PJX8 343 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 H0YL77 283 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 FUT3P21217 361 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
LSM6-201ENST00000296581 VAX1Q5SQQ9 334 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 Q6ZR03 302 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 OR2T35Q8NGX2 323 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 PRRT1Q99946 306 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 OR51M1Q9H341 326 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 AK3Q9UIJ7 227 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.22□□□□□ -0.29
LSM6-201ENST00000296581 ZNF154Q13106 437 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 LY6DQ14210 128 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 MICBQ29980 383 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 MPV17LQ2QL34 196 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 EDARADDQ8WWZ3 215 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 NIT2Q9NQR4 276 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 FZR1Q9UM11 496 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
LSM6-201ENST00000296581 RHBDL1O75783 438 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 ATG12O94817 140 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 IGHV2-70P01814 119 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 IL5P05113 134 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 DTYMKP23919 212 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 S100PP25815 95 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 CD40P25942 277 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 TSPAN5P62079 268 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 ST3GAL2Q16842 350 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 LINC00596Q86U02 117 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 STX12Q86Y82 276 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 BEST4Q8NFU0 473 aa13.21□□□□□ -0.29
LSM6-201ENST00000296581 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms