RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DNAL1Q4LDG9 190 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM220AQ7Z4H9 259 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 RDH10Q8IZV5 341 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 COQ2Q96H96 371 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 KIAA2026Q5HYC2 2103 aa12.67□□□□□ -0.38
TMEM41A-201ENST00000296254 KDM4BO94953 1096 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM106CPP0CH98 169 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 OR3A4PP47883 348 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 KPNB1Q14974 876 aaKnown RBP12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 UTF1Q5T230 341 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 OR2W3Q7Z3T1 314 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 ZNF329Q86UD4 541 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 MCRIP2Q9BUT9 160 aaKnown RBP12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 GABARAPL1Q9H0R8 117 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 GNG8Q9UK08 70 aa12.66□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 G3V2T6 193 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ZNF44P15621 663 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ZNF20P17024 532 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 SLC6A1P30531 599 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 PRRX1P54821 245 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ATP6AP1Q15904 470 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 TP53I3Q53FA7 332 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 TMEM244Q5VVB8 128 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 OR2G2Q8NGZ5 317 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 OR56B4Q8NH76 319 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 RPEQ96AT9 228 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 MBOAT4Q96T53 435 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ENOPH1Q9UHY7 261 aa12.65□□□□□ -0.38
TMEM41A-201ENST00000296254 ZNF729A6NN14 1252 aaPredicted RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 GYG2O15488 501 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 ISG15P05161 165 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 ZNF85Q03923 595 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 Q6P435 159 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 C18orf65Q6ZTR6 163 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 C5orf56Q8N8D9 126 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 OR9G1Q8NH87 305 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 CHPT1Q8WUD6 406 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 FGGYQ96C11 551 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 SPACA5Q96QH8 159 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 P2RX4Q99571 388 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 CIB1Q99828 191 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 RHOFQ9HBH0 211 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 OR6C3Q9NZP0 311 aa12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
TMEM41A-201ENST00000296254 KBTBD11-OT1A0A1B0GTJ5 212 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 A0A1W2PPI3 338 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 MT-ND2P03891 347 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 OCM2P0CE71 109 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 OCMP0CE72 109 aaPredicted RBP12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 ATP6V1E1P36543 226 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 TMED1Q13445 227 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 ZDHHC13Q8IUH4 622 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 KLHL30-AS1Q8NEE0 82 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 OR8J1Q8NGP2 316 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 OR13C9Q8NGT0 318 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 ZFP57Q9NU63 452 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 ING3Q9NXR8 418 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 FRRS1LQ9P0K9 344 aa12.63□□□□□ -0.39
TMEM41A-201ENST00000296254 STAB2Q8WWQ8 2551 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 NUDT19A8MXV4 375 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 H0YHG0 523 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 FGF16O43320 207 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 NFYBP25208 207 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 MYCNOSP40205 109 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 GLP1RP43220 463 aa12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 NANOS3P60323 173 aaKnown RBP12.62□□□□□ -0.39
TMEM41A-201ENST00000296254 SCN1BQ07699 218 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms