RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MTCP1P56278 107 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 FMODQ06828 376 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 Q96M85 177 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 ALKQ9UM73 1620 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM256Q8N2U0 113 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 BMPERQ8N8U9 685 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM40Q8WWA1 233 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 WDR34Q96EX3 536 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 LRRC3CA6NJW4 275 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CBLN1P23435 193 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 DAP3P51398 398 aaKnown RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 SEC11AP67812 179 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 MEF2BQ02080 365 aaPredicted RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 OR8B12Q8NGG6 310 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 PFN4Q8NHR9 129 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CTHRC1Q96CG8 243 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 TSPAN2O60636 221 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 FAM157CP0CG43 387 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 GFRA1P56159 465 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 TAS2R45P59539 299 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 ANKRD55Q3KP44 614 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CHST13Q8NET6 341 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 GNRHR2Q96P88 292 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 RNF208Q9H0X6 261 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF256Q9Y2P7 627 aaPredicted RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 HEBP2Q9Y5Z4 205 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 DEGS1O15121 323 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CPMP14384 443 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 ZFP36L2P47974 494 aaKnown RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 PRTGQ2VWP7 1150 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 KCNK15Q9H427 330 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 SDF2L1Q9HCN8 221 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 MED29Q9NX70 200 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CISD1Q9NZ45 108 aaKnown RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 B4GALT7Q9UBV7 327 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 DAPP1Q9UN19 280 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 HILPDAQ9Y5L2 63 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 SNAI2O43623 268 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CD5LO43866 347 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 HYPMO75409 117 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 BTG2P78543 158 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 RUNX2Q13950 521 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM164Q5U3C3 297 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 MRPL24Q96A35 216 aaKnown RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 SGK494Q96LW2 274 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 UBE2ZQ9H832 354 aaPredicted RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF160Q9HCG1 818 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 GP6Q9HCN6 339 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 AKAP11Q9UKA4 1901 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF217O75362 1048 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 NMUP48645 174 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CAMPP49913 170 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 GATSQ8NAP1 163 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF480Q8WV37 535 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 WBP1Q96G27 269 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 FLRT3Q9NZU0 649 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 EMC9Q9Y3B6 208 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CCL15-CCL14A0A0B4J2E2 113 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 C1orf226A1L170 272 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 FFAR1O14842 300 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 RUNX1Q01196 453 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 AQP3Q92482 292 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 MBNL3Q9NUK0 354 aaKnown RBP10.37□□□□□ -0.75
SNIP1-201ENST00000296215 INSL5Q9Y5Q6 135 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM131LA2VDJ0 1609 aa10.37□□□□□ -0.75
SNIP1-201ENST00000296215 CNTRLQ7Z7A1 2325 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 A0A1B0GTI1 187 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 HLA-DRB1P01911 266 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 LINC00869P0C866 280 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 GPX7Q96SL4 187 aaPredicted RBP10.36□□□□□ -0.75
SNIP1-201ENST00000296215 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
SNIP1-201ENST00000296215 HMGN4O00479 90 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 IAPPP10997 89 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 SRIP30626 198 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 FLT3LGP49771 235 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 FUT6P51993 359 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 EFNB2P52799 333 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 POM121L1PQ3SYA9 428 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 FAM222BQ8WU58 562 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 CRYGNQ8WXF5 182 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 QTRT1Q9BXR0 403 aaKnown RBP10.36□□□□□ -0.75
SNIP1-201ENST00000296215 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 TNS2Q63HR2 1409 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 LAMA4Q16363 1823 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms