RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 UMAD1C9J7I0 102 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 TK1P04183 234 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 COX5BP10606 129 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 GNRHRP30968 328 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
NCSTN-201ENST00000294785 CYB561P49447 251 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 RHEBQ15382 184 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 AWAT1Q58HT5 328 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 MEX3BQ6ZN04 569 aaKnown RBP11.78□□□□□ -0.52
NCSTN-201ENST00000294785 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 C14orf79Q96F83 325 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 TAAR9Q96RI9 348 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
NCSTN-201ENST00000294785 SLC25A31Q9H0C2 315 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 Q9N2K0 584 aa11.78□□□□□ -0.52
NCSTN-201ENST00000294785 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 ZNF587BE7ETH6 402 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 PITX3O75364 302 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 NAPSAO96009 420 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 SERPINA7P05543 415 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 CTXN2P0C2S0 81 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 OTX2P32243 289 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 FGF12P61328 243 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 SSPNQ14714 243 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 ZNF695Q8IW36 515 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 CPEB3Q8NE35 698 aaKnown RBP11.77□□□□□ -0.52
NCSTN-201ENST00000294785 ABHD3Q8WU67 409 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 HIST1H2BAQ96A08 127 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 CLCC1Q96S66 551 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 PARP12Q9H0J9 701 aaKnown RBP11.77□□□□□ -0.52
NCSTN-201ENST00000294785 SLC35B3Q9H1N7 401 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 SLC7A10Q9NS82 523 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.52
NCSTN-201ENST00000294785 NOSIPQ9Y314 301 aaKnown RBP11.77□□□□□ -0.52
NCSTN-201ENST00000294785 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 KIR2DS1A0A191URI9 304 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 K7N7A8 449 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 MRPL33O75394 65 aaKnown RBP11.77□□□□□ -0.53
NCSTN-201ENST00000294785 MMP9P14780 707 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 KIR2DS4P43632 304 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 NPBWR2P48146 333 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 S100A12P80511 92 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 KIR2DS1Q14954 304 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 IGSF11Q5DX21 431 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 DCAF12Q5T6F0 453 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 TBC1D26Q86UD7 250 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 ZNF565Q8N9K5 539 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 HSD17B11Q8NBQ5 300 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 SH3BGRL3Q9H299 93 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 PLEKHF2Q9H8W4 249 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-201ENST00000294785 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
NCSTN-201ENST00000294785 UBE2J1Q9Y385 318 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-201ENST00000294785 TNRC6AQ8NDV7 1962 aaKnown RBP11.77□□□□□ -0.53
NCSTN-201ENST00000294785 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 GLI4P10075 376 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 TDGF1P13385 188 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 HABP2Q14520 560 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 OR1J1Q8NGS3 322 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 USB1Q9BQ65 265 aaKnown RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 PAPOLGQ9BWT3 736 aaKnown RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 NKX2-6A6NCS4 301 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 BTBD17A6NE02 478 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 PRDX4Q13162 271 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 PDCD1Q15116 288 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 CEACAM21Q3KPI0 293 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 LINC00596Q86U02 117 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 ZNF561Q8N587 486 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 IL22RA2Q969J5 263 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 KCNJ16Q9NPI9 418 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 SDK2Q58EX2 2172 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 PCP4L1A6NKN8 68 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 ZNF44P15621 663 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 BCL3P20749 454 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 FHITP49789 147 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 MEOX2P50222 304 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 BAXQ07812 192 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 MKXQ8IYA7 352 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 ZDHHC23Q8IYP9 409 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 ZNF845Q96IR2 970 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-201ENST00000294785 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
NCSTN-201ENST00000294785 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
NCSTN-201ENST00000294785 HSPA12AO43301 675 aa11.75□□□□□ -0.53
NCSTN-201ENST00000294785 TUSC2O75896 110 aa11.75□□□□□ -0.53
NCSTN-201ENST00000294785 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
NCSTN-201ENST00000294785 UCP1P25874 307 aa11.75□□□□□ -0.53
NCSTN-201ENST00000294785 RAB1AP62820 205 aa11.75□□□□□ -0.53
NCSTN-201ENST00000294785 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms