RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FCGR2CP31995 323 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 RBMXP38159 391 aaKnown RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 IL13RA2Q14627 380 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 SRSF7Q16629 238 aaKnown RBP eCLIP7.79□□□□□ -1.16
PDPN-201ENST00000294489 ABCA11PQ4W5N1 156 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 FAM76BQ5HYJ3 339 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 FAM58AQ8N1B3 248 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 TOMM40LQ969M1 308 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 NMES1Q9C002 83 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 RIMS4Q9H426 269 aaPredicted RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 C1orf123Q9NWV4 160 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 ANKRD11Q6UB99 2663 aaPredicted RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 A0A0G2JNJ9 132 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 LRP5LA4QPB2 252 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 A8MXE2 369 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 PRRG2O14669 202 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 AGFG2O95081 481 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 CECR9P0C854 216 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 AP2S1P53680 142 aaPredicted RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 ERVS71-1P61550 626 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 RBM39Q14498 530 aaKnown RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 MRGPRGQ86SM5 289 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 Q8IYB0 196 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 ADAT1Q9BUB4 502 aaKnown RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 Q9UFV3 132 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
PDPN-201ENST00000294489 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 LAMA5O15230 3695 aa7.79□□□□□ -1.16
PDPN-201ENST00000294489 ERVH48-1M5A8F1 160 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 CFDP00746 253 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 RPS2P15880 293 aaKnown RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 KITLGP21583 273 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PSMB6P28072 239 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 HERV-K104P61576 105 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PSG7Q13046 419 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ANKRD55Q3KP44 614 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 Q6ZS49 121 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 KLF14Q8TD94 323 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 BCL2L14Q9BZR8 327 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PRORYQ9H606 182 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ASF1BQ9NVP2 202 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 RDH8Q9NYR8 311 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 IL36RNQ9UBH0 155 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 APC2O95996 2303 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 IGHV2OR16-5A0A0B4J2B6 119 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 KIR2DS1A0A191URI9 304 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 OR2F2O95006 317 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 GLAP06280 429 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ACAA1P09110 424 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 DUSP1P28562 367 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 KIR2DS4P43632 304 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PIGPP57054 158 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 FXYD4P59646 89 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 OR2F1Q13607 317 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ZNF345Q14585 488 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 KIR2DS1Q14954 304 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 OR8G1Q15617 311 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PRR30Q53SZ7 412 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 C6orf183Q5T699 404 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 GFRALQ6UXV0 394 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 LILRB2Q8N423 598 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 INO80EQ8NBZ0 244 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 OR5T2Q8NGG2 359 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 GTF3AQ92664 365 aaKnown RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 PIK3IP1Q96FE7 263 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ZNF488Q96MN9 340 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 DMRTA2Q96SC8 542 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 VRK1Q99986 396 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 SYT3Q9BQG1 590 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ELOVL5Q9NYP7 299 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 PTPRZ1P23471 2315 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.78□□□□□ -1.16
PDPN-201ENST00000294489 CRYM-AS1A6NIL9 109 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 HSPB6O14558 160 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ADAP1O75689 374 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 NAPSAO96009 420 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 TK1P04183 234 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 ID4P47928 161 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 UCP3P55916 312 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 SLC51BQ86UW2 128 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 SLC38A6Q8IZM9 456 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 SUMF2Q8NBJ7 301 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 LIME1Q9H400 295 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 Q9N2K0 584 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 TMEM100Q9NV29 134 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 MEMO1Q9Y316 297 aa7.78□□□□□ -1.16
PDPN-201ENST00000294489 KANTRA0A1W2PQU2 76 aa7.77□□□□□ -1.17
PDPN-201ENST00000294489 TMEM210A6NLX4 147 aa7.77□□□□□ -1.17
PDPN-201ENST00000294489 C1QTNF9BB2RNN3 333 aa7.77□□□□□ -1.17
PDPN-201ENST00000294489 RHBDL1O75783 438 aa7.77□□□□□ -1.17
PDPN-201ENST00000294489 DIRAS3O95661 229 aa7.77□□□□□ -1.17
PDPN-201ENST00000294489 CTXN2P0C2S0 81 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms