RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ARG2P78540 354 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM187Q14656 261 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 ADAMTS17Q8TE56 1095 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 ARL11Q969Q4 196 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 ERGIC1Q969X5 290 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 SPSB4Q96A44 273 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 HIST1H2AAQ96QV6 131 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 MTCH1Q9NZJ7 389 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 SPENQ96T58 3664 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 GTF3C1Q12789 2109 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 AKR1D1P51857 326 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 SLC10A1Q14973 349 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 RDH5Q92781 318 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 APOBEC3DQ96AK3 386 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 TP53RKQ96S44 253 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 PURGQ9UJV8 347 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 F8W036 122 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 LINC01387J3KSC0 135 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 DEDDO75618 318 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 PPYP01298 95 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 BLOC1S1P78537 153 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 OR2T2Q6IF00 324 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
NCKIPSD-201ENST00000294129 PQLC2LA1A4F0 135 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 TRAPPC2LH3BP13 241 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 FGF16O43320 207 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 TNFSF12O43508 249 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 FAM157CP0CG43 387 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 LYL1P12980 280 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 NAAAQ02083 359 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 SRSF6Q13247 344 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 RNFT1Q5M7Z0 435 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 GLYATL2Q8WU03 294 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 LINC00470Q9BZP3 86 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 PRELID3BQ9Y3B1 194 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 CD300LBA8K4G0 201 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 H7C2Y5 167 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 ADCYAP1P18509 176 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 RPL35P42766 123 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 LPAR6P43657 344 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM268Q5VZI3 342 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 FBXW12Q6X9E4 464 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 CBLN2Q8IUK8 224 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 IL36GQ9NZH8 169 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 DNAJB11Q9UBS4 358 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 LPAR3Q9UBY5 353 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 TRAV39A0A0B4J263 110 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM218A2RU14 115 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 KLRC4-KLRK1H3BQV0 150 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 HSD17B6O14756 317 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 CA6P23280 308 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 APLNRP35414 380 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 CLN3Q13286 438 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 OR4A4PQ8NGN8 299 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 KLF13Q9Y2Y9 288 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 ZNF175Q9Y473 711 aa13.56□□□□□ -0.24
NCKIPSD-201ENST00000294129 A0A1B0GV50 99 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 FLI1Q01543 452 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 OTOGLQ3ZCN5 2332 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 PRR18Q8N4B5 295 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 SLC35G3Q8N808 338 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 MOB3AQ96BX8 217 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 SYT3Q9BQG1 590 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 MLXQ9UH92 298 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 CD46P15529 392 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 WNT5AP41221 380 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 STK11Q15831 433 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 CEACAM21Q3KPI0 293 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 LDLRAD3Q86YD5 345 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 MKXQ8IYA7 352 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 FER1L6-AS2Q96M78 137 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 TECTBQ96PL2 329 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 LHX6Q9UPM6 363 aa13.55□□□□□ -0.24
NCKIPSD-201ENST00000294129 RPL36A-HNRNPH2H7BZ11 118 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 NME2P1O60361 137 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 PLA2G2CQ5R387 149 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM211Q6ICI0 200 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 MDP1Q86V88 176 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 ZNF565Q8N9K5 539 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 SPRR3Q9UBC9 169 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 AMDHD2Q9Y303 409 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 UBE2J1Q9Y385 318 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 CELA3BP08861 270 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 MST1LQ2TV78 715 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 LGI3Q8N145 548 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 IL1F10Q8WWZ1 152 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 MAGT1Q9H0U3 335 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM100Q9NV29 134 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 TUBD1Q9UJT1 453 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 ICE1Q9Y2F5 2266 aa13.54□□□□□ -0.24
NCKIPSD-201ENST00000294129 ANKRD30BLA7E2S9 258 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms