RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 NCR3LG1Q68D85 454 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 MZT2AQ6P582 158 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 C10orf99Q6UWK7 81 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 KCTD20Q7Z5Y7 419 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 MS4A15Q8N5U1 240 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 TPRX1Q8N7U7 411 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 ZNF454Q8N9F8 522 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 OR5A2Q8NGI9 324 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 OR14K1Q8NGZ2 314 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 OR5R1Q8NH85 324 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 TRMT10AQ8TBZ6 339 aaKnown RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 ACOT12Q8WYK0 555 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 THRSPQ92748 146 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 DMRTB1Q96MA1 342 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 RGCCQ9H4X1 137 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 HES4Q9HCC6 221 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 EXOSC4Q9NPD3 245 aaKnown RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 ERVK13-1Q9NX77 482 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 RABL2AQ9UBK7 228 aaPredicted RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 OR14J1Q9UGF5 321 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 MRM2Q9UI43 246 aaKnown RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 LAMP5Q9UJQ1 280 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 RABL2BQ9UNT1 228 aa7.1□□□□□ -1.27
TFF1-201ENST00000291527 SF3B6Q9Y3B4 125 aaKnown RBP7.1□□□□□ -1.27
TFF1-201ENST00000291527 DAPL1A0PJW8 107 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 TMEM82A0PJX8 343 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 SH2D7A6NKC9 451 aaPredicted RBP7.09□□□□□ -1.27
TFF1-201ENST00000291527 C17orf98A8MV24 154 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 ODF3BA8MYP8 253 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 NRASP01111 189 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 APOA1P02647 267 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 APOC1P02654 83 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 TK1P04183 234 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 OR2T7P0C7T2 308 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 CD24P25063 80 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 ERVK11-1P61568 191 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 LSM3P62310 102 aaKnown RBP7.09□□□□□ -1.27
TFF1-201ENST00000291527 COL10A1Q03692 680 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 RIPPLY1Q0D2K3 151 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 GALEQ14376 348 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 UBE2V2Q15819 145 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 TRIM16LQ309B1 348 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 CCDC58Q4VC31 144 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 TCTEX1D4Q5JR98 221 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 TMEM42Q69YG0 159 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 CD200R1LQ6Q8B3 271 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 Q6ZNX1 250 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 Q6ZTK2 550 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 COMMD2Q86X83 199 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 SYS1Q8N2H4 156 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 OR52N4Q8NGI2 321 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 KCTD12Q96CX2 325 aaKnown RBP7.09□□□□□ -1.27
TFF1-201ENST00000291527 HIST1H2AAQ96QV6 131 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 NRIP2Q9BQI9 281 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.27
TFF1-201ENST00000291527 OR51E2Q9H255 320 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
TFF1-201ENST00000291527 BABAM2Q9NXR7 383 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 MTCH1Q9NZJ7 389 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 V9GYS6 101 aa7.09□□□□□ -1.27
TFF1-201ENST00000291527 DNAH7Q8WXX0 4024 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 TRBV23-1A0A0A0MS06 115 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 A0A1W2PRX2 142 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 J3QRE1 110 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 J3QT63 122 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 NOS1APO75052 506 aaPredicted RBP7.08□□□□□ -1.28
TFF1-201ENST00000291527 ZNF737O75373 536 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ARG1P05089 322 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 OCM2P0CE71 109 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 OCMP0CE72 109 aaPredicted RBP7.08□□□□□ -1.28
TFF1-201ENST00000291527 LIMS3P0CW19 117 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 LIMS4P0CW20 117 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 DUSP1P28562 367 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 GDNFP39905 211 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 RANBP1P43487 201 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 NPBWR2P48146 333 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ETV1P50549 477 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ROM1Q03395 351 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 SSX1Q16384 188 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 SSX2Q16385 188 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 DDI2Q5TDH0 399 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 LIPKQ5VXJ0 399 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ZNF322Q6U7Q0 402 aaPredicted RBP7.08□□□□□ -1.28
TFF1-201ENST00000291527 TPRA1Q86W33 373 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ZNF679Q8IYX0 411 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 RDH10Q8IZV5 341 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 Q8N2B8 174 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 OR5D13Q8NGL4 314 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 OR4C13Q8NGP0 309 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 ZNF671Q8TAW3 534 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 SETD6Q8TBK2 473 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 SLAMF9Q96A28 289 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 SLC25A46Q96AG3 418 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 PHF21AQ96BD5 680 aa7.08□□□□□ -1.28
TFF1-201ENST00000291527 RBMXL1Q96E39 390 aaKnown RBP7.08□□□□□ -1.28
TFF1-201ENST00000291527 CNN2Q99439 309 aaKnown RBP7.08□□□□□ -1.28
TFF1-201ENST00000291527 TBX5Q99593 518 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms