RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 H2AFB1P0C5Y9 115 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 HKR1P10072 659 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 PRF1P14222 555 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 ZNF17P17021 662 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 CALHM1Q8IU99 346 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 SLC30A7Q8NEW0 376 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 NINJ1Q92982 152 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 HINT2Q9BX68 163 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 GPR35Q9HC97 309 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 GNG13Q9P2W3 67 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 FZR1Q9UM11 496 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 ARGFXA6NJG6 315 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 DEGS1O15121 323 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 NGFP01138 241 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 PPYP01298 95 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 STARD6P59095 220 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 TESK1Q15569 626 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 SPANXN5Q5MJ07 72 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 ZDHHC23Q8IYP9 409 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 GAPTQ8N292 157 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 OR10J5Q8NHC4 309 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 NANPQ8TBE9 248 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
SMAD6-201ENST00000288840 RFNGQ9Y644 331 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 MLF1P58340 268 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 TMEM267Q0VDI3 215 aaPredicted RBP13.79□□□□□ -0.2
SMAD6-201ENST00000288840 PMS2CLQ68D20 193 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 UQCC3Q6UW78 93 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 BSCL2Q96G97 398 aaPredicted RBP13.79□□□□□ -0.2
SMAD6-201ENST00000288840 PLEKHA2Q9HB19 425 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 C19orf12Q9NSK7 152 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 PRELID3BQ9Y3B1 194 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 OR1C1Q15619 314 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 VHLLQ6RSH7 139 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 TBC1D26Q86UD7 250 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 SDSLQ96GA7 329 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 ANGPTL4Q9BY76 406 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 IGLV3-12A0A075B6K2 115 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 A0A0U1RQV5 110 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 NQO2P16083 231 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 TAGLN2P37802 199 aaKnown RBP13.79□□□□□ -0.2
SMAD6-201ENST00000288840 RAB11AP62491 216 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 RPL23AP62750 156 aaKnown RBP13.79□□□□□ -0.2
SMAD6-201ENST00000288840 QRFPP83859 136 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 HIKESHIQ53FT3 197 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 SLC16A13Q7RTY0 426 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 INTS12Q96CB8 462 aaKnown RBP13.79□□□□□ -0.2
SMAD6-201ENST00000288840 NIT2Q9NQR4 276 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 EML5Q05BV3 1969 aa13.79□□□□□ -0.2
SMAD6-201ENST00000288840 CHATP28329 748 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 C4orf17Q53FE4 359 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 CXorf66Q5JRM2 361 aaPredicted RBP13.78□□□□□ -0.2
SMAD6-201ENST00000288840 PLK3Q9H4B4 646 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 MED9Q9NWA0 146 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 K7ESF4 209 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 CTRB1P17538 263 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 AWAT1Q58HT5 328 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 CTRB2Q6GPI1 263 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
SMAD6-201ENST00000288840 Q96M66 194 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 SLC25A31Q9H0C2 315 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 STARD10Q9Y365 291 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 MUC22E2RYF6 1773 aaPredicted RBP13.78□□□□□ -0.2
SMAD6-201ENST00000288840 CLDN1O95832 211 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 IL2RGP31785 369 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 ECI1P42126 302 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 CCL11P51671 97 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 FOXG1P55316 489 aaPredicted RBP13.78□□□□□ -0.2
SMAD6-201ENST00000288840 LIAT1Q6ZQX7 453 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 DEFB123Q8N688 67 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 POC1AQ8NBT0 407 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
SMAD6-201ENST00000288840 BDP1A6H8Y1 2624 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 A0A1W2PPE2 198 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 TERTO14746 1132 aaKnown RBP13.77□□□□□ -0.2
SMAD6-201ENST00000288840 SELEP16581 610 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 RAB13P51153 203 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 COL19A1Q14993 1142 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 RHEBQ15382 184 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 IL34Q6ZMJ4 242 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 RFESDQ8TAC1 157 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 KCNE4Q8WWG9 221 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 PNRC2Q9NPJ4 139 aaKnown RBP13.77□□□□□ -0.2
SMAD6-201ENST00000288840 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.2
SMAD6-201ENST00000288840 MRPL14Q6P1L8 145 aaKnown RBP13.77□□□□□ -0.21
SMAD6-201ENST00000288840 PILRBQ9UKJ0 227 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 KPTNQ9Y664 436 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 ABCA1O95477 2261 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 SOX15O60248 233 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 S100A2P29034 98 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF154Q13106 437 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF266Q14584 549 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 SPINK9Q5DT21 86 aa13.77□□□□□ -0.21
SMAD6-201ENST00000288840 DUSP13Q9UII6 198 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms