RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 FRRS1LQ9P0K9 344 aa11.26□□□□□ -0.61
TPM1-202ENST00000288398 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
TPM1-202ENST00000288398 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
TPM1-202ENST00000288398 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
TPM1-202ENST00000288398 ODAMA1E959 279 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 MAGEB3O15480 346 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 KDM4BO94953 1096 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 OR2F2O95006 317 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 LPLP06858 475 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 DBTP11182 482 aaKnown RBP11.25□□□□□ -0.61
TPM1-202ENST00000288398 CD24P25063 80 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 NFYBP25208 207 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 OR3A4PP47883 348 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 GLIPR1P48060 266 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 FDX2Q6P4F2 183 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 Q6ZS46 218 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 CORO2AQ92828 525 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 HRASLS5Q96KN8 279 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 C4orf36Q96KX1 117 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 OCSTAMPQ9BR26 566 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 COMMD4Q9H0A8 199 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 ZCCHC4Q9H5U6 513 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
TPM1-202ENST00000288398 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
TPM1-202ENST00000288398 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 OOSP1A8MZH6 123 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 MMP23AO75900 390 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 MT-ND2P03891 347 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 CSN2P05814 226 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 FAM106CPP0CH98 169 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 IGLL1P15814 213 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 GLP1RP43220 463 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 CD83Q01151 205 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 ALKBH1Q13686 389 aaKnown RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 ATXN7L3Q14CW9 347 aaPredicted RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 SERPINA12Q8IW75 414 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 ZNF565Q8N9K5 539 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 TSEN15Q8WW01 171 aaKnown RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 DPF1Q92782 380 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 RPEQ96AT9 228 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 RBM14Q96PK6 669 aaKnown RBP11.24□□□□□ -0.61
TPM1-202ENST00000288398 GPER1Q99527 375 aa11.24□□□□□ -0.61
TPM1-202ENST00000288398 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 HSPB6O14558 160 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 LMO1P25800 156 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 C21orf33P30042 268 aaPredicted RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 MTNR1BP49286 362 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 NANOS3P60323 173 aaKnown RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 MRPL28Q13084 256 aaKnown RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 HLA-DRB5Q30154 266 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 PAN3Q58A45 887 aaKnown RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 FOXB2Q5VYV0 432 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 MYDGFQ969H8 173 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 TOMM40LQ969M1 308 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 RCC1LQ96I51 464 aaKnown RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 Q96MT0 163 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 NR1H4Q96RI1 486 aaPredicted RBP11.23□□□□□ -0.61
TPM1-202ENST00000288398 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 GPR61Q9BZJ8 451 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 ZNF286AQ9HBT8 521 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 DHDHQ9UQ10 334 aa11.23□□□□□ -0.61
TPM1-202ENST00000288398 MEIKINA0A087WXM9 373 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 TMEM212A6NML5 194 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 H0YJX3 145 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 SLC33A1O00400 549 aaPredicted RBP11.22□□□□□ -0.61
TPM1-202ENST00000288398 EI24O14681 340 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 SULT1B1O43704 296 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 DUS4LO95620 317 aaKnown RBP11.22□□□□□ -0.61
TPM1-202ENST00000288398 FADS2O95864 444 aaKnown RBP11.22□□□□□ -0.61
TPM1-202ENST00000288398 MPIG6BO95866 241 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 CCDC159P0C7I6 412 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 CD34P28906 385 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
TPM1-202ENST00000288398 HES1Q14469 280 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 KISS1Q15726 138 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
TPM1-202ENST00000288398 SLC25A30Q5SVS4 291 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 BAIAP2L2Q6UXY1 529 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 OR10AC1Q8NH08 325 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 OR9G1Q8NH87 305 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 OR5AK2Q8NH90 309 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 PELI1Q96FA3 418 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 ALG8Q9BVK2 526 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 FAM192AQ9GZU8 254 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 NOTCH3Q9UM47 2321 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms