RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 STMND1H3BQB6 276 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 CYB5BO43169 146 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 ERVFRD-1P60508 538 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 DLK1P80370 383 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 TMEM187Q14656 261 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 TVP23CQ96ET8 276 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 TMEM68Q96MH6 324 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 NAA60Q9H7X0 242 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 C19orf25Q9UFG5 118 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 ZNF391Q9UJN7 358 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 PADI1Q9ULC6 663 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 HS3ST3B1Q9Y662 390 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 ACACAQ13085 2346 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 A0A1B0GV50 99 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 MSTNO14793 375 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 GDF9O60383 454 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 SRP19P09132 144 aaKnown RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 GLIPR1P48060 266 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 CSNK1A1P48729 337 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 ZNF429Q86V71 674 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 ZNF100Q8IYN0 542 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 JSRP1Q96MG2 331 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 RBM14Q96PK6 669 aaKnown RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 NECAP2Q9NVZ3 263 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 FOXD3Q9UJU5 478 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 SIT1Q9Y3P8 196 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 URGCP-MRPS24S4R325 110 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 SVILO95425 2214 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 IGKV1D-8A0A087WSZ0 117 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 TCAPO15273 167 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 DNPH1O43598 174 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 TRGC1P0CF51 173 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 FCGR2AP12318 317 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 CRYGSP22914 178 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 OR8B8Q15620 311 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 SLC25A45Q8N413 288 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 RAB24Q969Q5 203 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 NOL4LQ96MY1 436 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 HIPK2Q9H2X6 1198 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 KIAA1456Q9P272 454 aa9.01□□□□□ -0.97
SKA1-201ENST00000285116 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
SKA1-201ENST00000285116 NSG1A0A0A6YYJ2 146 aa9□□□□□ -0.97
SKA1-201ENST00000285116 A0A1B0GWJ7 208 aa9□□□□□ -0.97
SKA1-201ENST00000285116 A0A1W2PNR3 127 aa9□□□□□ -0.97
SKA1-201ENST00000285116 IL2RGP31785 369 aa9□□□□□ -0.97
SKA1-201ENST00000285116 RND3P61587 244 aa9□□□□□ -0.97
SKA1-201ENST00000285116 MRPS34P82930 218 aaKnown RBP9□□□□□ -0.97
SKA1-201ENST00000285116 TMEM42Q69YG0 159 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SLC35E3Q7Z769 313 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SPTSSAQ969W0 71 aa9□□□□□ -0.97
SKA1-201ENST00000285116 ABHD14BQ96IU4 210 aa9□□□□□ -0.97
SKA1-201ENST00000285116 NIPSNAP3BQ9BS92 247 aa9□□□□□ -0.97
SKA1-201ENST00000285116 METTL9Q9H1A3 318 aa9□□□□□ -0.97
SKA1-201ENST00000285116 PPP1R14DQ9NXH3 145 aa9□□□□□ -0.97
SKA1-201ENST00000285116 R4GN57 208 aa9□□□□□ -0.97
SKA1-201ENST00000285116 LOC102723996A0A087X1L8 192 aa9□□□□□ -0.97
SKA1-201ENST00000285116 MED19A0JLT2 244 aaPredicted RBP9□□□□□ -0.97
SKA1-201ENST00000285116 H0YL77 283 aa9□□□□□ -0.97
SKA1-201ENST00000285116 TP53I11O14683 189 aa9□□□□□ -0.97
SKA1-201ENST00000285116 OR2J2O76002 312 aa9□□□□□ -0.97
SKA1-201ENST00000285116 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
SKA1-201ENST00000285116 FGF7P21781 194 aa9□□□□□ -0.97
SKA1-201ENST00000285116 GUCA1AP43080 201 aaPredicted RBP9□□□□□ -0.97
SKA1-201ENST00000285116 CLDN17P56750 224 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SRSF7Q16629 238 aaKnown RBP eCLIP9□□□□□ -0.97
SKA1-201ENST00000285116 FAM27BQ5VT28 67 aa9□□□□□ -0.97
SKA1-201ENST00000285116 CARD17Q5XLA6 110 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SHISA6Q6ZSJ9 500 aa9□□□□□ -0.97
SKA1-201ENST00000285116 LIN37Q96GY3 246 aaPredicted RBP9□□□□□ -0.97
SKA1-201ENST00000285116 CYYR1Q96J86 154 aa9□□□□□ -0.97
SKA1-201ENST00000285116 RASL10BQ96S79 203 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SYT3Q9BQG1 590 aa9□□□□□ -0.97
SKA1-201ENST00000285116 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
SKA1-201ENST00000285116 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
SKA1-201ENST00000285116 PIGLQ9Y2B2 252 aa9□□□□□ -0.97
SKA1-201ENST00000285116 PTRH2Q9Y3E5 179 aaKnown RBP9□□□□□ -0.97
SKA1-201ENST00000285116 TNRC6BQ9UPQ9 1833 aaKnown RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 C5orf63A6NC05 138 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 B4DEV8 164 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 OR5H8P0DN80 308 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 FAHP16930 419 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 CCL20P78556 96 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 RAB35Q15286 201 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 CNN3Q15417 329 aaKnown RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 SHBQ15464 509 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 SPSB3Q6PJ21 355 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 Q6ZS49 121 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 DPPA2Q7Z7J5 298 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 TGIF2LXQ8IUE1 241 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 ABHD5Q8WTS1 349 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 THAP3Q8WTV1 239 aaPredicted RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 FRZBQ92765 325 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 WDR54Q9H977 334 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms