RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 CDIPTO14735 213 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 SPINT2O43291 252 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 WISP1O95388 367 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 CRYAAP02489 173 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 NMBP08949 121 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 OR2B8PP59922 312 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 FRZBQ92765 325 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 ADAT1Q9BUB4 502 aaKnown RBP12.49□□□□□ -0.41
TMEM47-201ENST00000275954 CHRNA10Q9GZZ6 450 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 DNAH14Q0VDD8 3507 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 POLQO75417 2590 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 C9orf172C9J069 976 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 UNC119Q13432 240 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 OR11L1Q8NGX0 322 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 NAA60Q9H7X0 242 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 STARD10Q9Y365 291 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
TMEM47-201ENST00000275954 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 CST2P09228 141 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 NDUFB7P17568 137 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 TLE4Q04727 773 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 WFDC8Q8IUA0 241 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 NFAM1Q8NET5 270 aaPredicted RBP12.49□□□□□ -0.41
TMEM47-201ENST00000275954 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 SLC2A9Q9NRM0 540 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 FRMPD3Q5JV73 1810 aa12.49□□□□□ -0.41
TMEM47-201ENST00000275954 A0A0G2JMM0 328 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 A0A1W2PPB8 328 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 A0A1W2PRS3 328 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 RNF212BA8MTL3 300 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 KIR3DP1A8MWS1 328 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 HMGB3O15347 200 aaKnown RBP12.48□□□□□ -0.41
TMEM47-201ENST00000275954 NPIPB7O75200 414 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 BCL3P20749 454 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 CLEC12BQ2HXU8 276 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 MIDNQ504T8 468 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
TMEM47-201ENST00000275954 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 FN3KRPQ9HA64 309 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 IGHV3-43A0A0B4J1X8 118 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 IGHV3-43DP0DP04 118 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
TMEM47-201ENST00000275954 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 FDX2Q6P4F2 183 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 TIMP4Q99727 224 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
TMEM47-201ENST00000275954 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 F2RL1P55085 397 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
TMEM47-201ENST00000275954 ANKHD1Q8IWZ3 2542 aaKnown RBP12.48□□□□□ -0.41
TMEM47-201ENST00000275954 TRAV17A0A0B4J275 112 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 EFNA2O43921 213 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 ZNF83P51522 516 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 SLC38A6Q8IZM9 456 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 WNT2BQ93097 391 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 NIPSNAP3BQ9BS92 247 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 ALX4Q9H161 411 aaPredicted RBP12.47□□□□□ -0.41
TMEM47-201ENST00000275954 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 CLDN16Q9Y5I7 305 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 LINC00862A6NCI5 91 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 TUBAL3A6NHL2 446 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 SPRY3O43610 288 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 ZP3P21754 424 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 LY6DQ14210 128 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 RNPS1Q15287 305 aaKnown RBP12.47□□□□□ -0.41
TMEM47-201ENST00000275954 ZNF660Q6AZW8 331 aaPredicted RBP12.47□□□□□ -0.41
TMEM47-201ENST00000275954 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 GPR27Q9NS67 375 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 USP9YO00507 2555 aaPredicted RBP12.47□□□□□ -0.41
TMEM47-201ENST00000275954 PCDH15Q96QU1 1955 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 CENPEQ02224 2701 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 SOX15O60248 233 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 AGFG2O95081 481 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
TMEM47-201ENST00000275954 NGFP01138 241 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 SNCAP37840 140 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 RBPJQ06330 500 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 PRAMEF6Q5VXH4 476 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 FAM131CQ96AQ9 280 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 OR5AC2Q9NZP5 309 aa12.47□□□□□ -0.41
TMEM47-201ENST00000275954 RNASEK-C17orf49H0YIS7 233 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms