RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 GLIPR1P48060 266 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 MTNR1BP49286 362 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 LGALS4P56470 323 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 AESQ08117 197 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 AANATQ16613 207 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 PLA1AQ53H76 456 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 ELP2Q6IA86 826 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 TNFAIP8L1Q8WVP5 186 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 GHSRQ92847 366 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 DCLRE1BQ9H816 532 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 PLCXD1Q9NUJ7 323 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 EFCAB10A6NFE3 127 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 CHST1O43916 411 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 ALDOBP05062 364 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 CSN2P05814 226 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 CD2P06729 351 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 GDNFP39905 211 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 RAB13P51153 203 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 HIST2H2BDQ6DRA6 164 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 AHSA2Q719I0 299 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 BPIFB6Q8NFQ5 453 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 GPER1Q99527 375 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 CNOT2Q9NZN8 540 aaKnown RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 ZNF581Q9P0T4 197 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 UBE2J1Q9Y385 318 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
HMGN3-201ENST00000275036 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
HMGN3-201ENST00000275036 PRKDCP78527 4128 aaKnown RBP11.65□□□□□ -0.54
HMGN3-201ENST00000275036 TRAV24A0A0B4J272 114 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 ODAMA1E959 279 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 HSPB6O14558 160 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 DEGS1O15121 323 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 MAGEB3O15480 346 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 CDRT1O95170 752 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 DYNC1I2Q13409 638 aaKnown RBP11.65□□□□□ -0.54
HMGN3-201ENST00000275036 ATXN7L3Q14CW9 347 aaPredicted RBP11.65□□□□□ -0.54
HMGN3-201ENST00000275036 SSX2Q16385 188 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 PIGYQ3MUY2 71 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 UTF1Q5T230 341 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 CCBE1Q6UXH8 406 aaPredicted RBP11.65□□□□□ -0.54
HMGN3-201ENST00000275036 CHST4Q8NCG5 386 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 Q8NFD4 153 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 OR51T1Q8NGJ9 327 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 CORO2AQ92828 525 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 FAM192AQ9GZU8 254 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 TMEM138Q9NPI0 162 aa11.65□□□□□ -0.54
HMGN3-201ENST00000275036 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
HMGN3-201ENST00000275036 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
HMGN3-201ENST00000275036 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 TRAV8-7A0A075B6U6 113 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 H0YJX3 145 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 BDKRB2P30411 391 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 PTGFRP43088 359 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 SLC34A1Q06495 639 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 MED21Q13503 144 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 Q499Y3 187 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 YIF1BQ5BJH7 314 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 HEPN1Q6WQI6 88 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
HMGN3-201ENST00000275036 OR14A2Q96R54 314 aa11.64□□□□□ -0.55
HMGN3-201ENST00000275036 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 FAM172BPA6NC97 362 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 GPX5O75715 221 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 HTR3BO95264 441 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 TSPAN15O95858 294 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 CDK2P24941 298 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 ZNF93P35789 620 aaPredicted RBP11.63□□□□□ -0.55
HMGN3-201ENST00000275036 AQP4P55087 323 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 WNT4P56705 351 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 PPP3R1P63098 170 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 RIPK1Q13546 671 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms