RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 FUT6P51993 359 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 TLE1Q04724 770 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 PPA1Q15181 289 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 SLC30A7Q8NEW0 376 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 INTS12Q96CB8 462 aaKnown RBP14.32□□□□□ -0.12
VPS54-201ENST00000272322 ADGRG7Q96K78 797 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 TTTY12Q9BZ98 90 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 EIF5A2Q9GZV4 153 aaKnown RBP14.32□□□□□ -0.12
VPS54-201ENST00000272322 UQCC1Q9NVA1 299 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 MLXQ9UH92 298 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 RBM7Q9Y580 266 aaKnown RBP14.32□□□□□ -0.12
VPS54-201ENST00000272322 CRYM-AS1A6NIL9 109 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 PET100P0DJ07 73 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 FGF23Q9GZV9 251 aaPredicted RBP14.32□□□□□ -0.12
VPS54-201ENST00000272322 NAA60Q9H7X0 242 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 PCDHB16Q9NRJ7 776 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 ARHGAP21Q5T5U3 1957 aa14.32□□□□□ -0.12
VPS54-201ENST00000272322 NKX2-6A6NCS4 301 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 PDCD6O75340 191 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 TFF1P04155 84 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 ASB13Q8WXK3 278 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 RHBDL1O75783 438 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 TNFSF15O95150 251 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 CTSDP07339 412 aaPredicted RBP14.31□□□□□ -0.12
VPS54-201ENST00000272322 ZNF44P15621 663 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 PVALBP20472 110 aaPredicted RBP14.31□□□□□ -0.12
VPS54-201ENST00000272322 FUT3P21217 361 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 GFRA1P56159 465 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 MST1LQ2TV78 715 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 DCAF10Q5QP82 559 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 TMEM164Q5U3C3 297 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 PHYHIPLQ96FC7 376 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 TDGF1P13385 188 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 RBM11P57052 281 aaKnown RBP14.31□□□□□ -0.12
VPS54-201ENST00000272322 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 FBXO7Q9Y3I1 522 aa14.31□□□□□ -0.12
VPS54-201ENST00000272322 PPYP01298 95 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 PCBD1P61457 104 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ERVS71-1P61550 626 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 CXorf66Q5JRM2 361 aaPredicted RBP14.3□□□□□ -0.12
VPS54-201ENST00000272322 SVBPQ8N300 66 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ZNF565Q8N9K5 539 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 APH1AQ96BI3 265 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 HIST1H2AAQ96QV6 131 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 NUDT16L1Q9BRJ7 211 aaKnown RBP14.3□□□□□ -0.12
VPS54-201ENST00000272322 WFDC1Q9HC57 220 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 CCL28Q9NRJ3 127 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ANAPC10Q9UM13 185 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ARPC4-TTLL3A0A0A6YYG9 625 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 IGKV1D-13A0A0B4J2D9 117 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ATXN7O15265 892 aaPredicted RBP14.3□□□□□ -0.12
VPS54-201ENST00000272322 SSSCA1O60232 199 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 MMP7P09237 267 aaPredicted RBP14.3□□□□□ -0.12
VPS54-201ENST00000272322 IGKV1-13P0DP09 117 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 GAPTQ8N292 157 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 ABHD14AQ9BUJ0 271 aa14.3□□□□□ -0.12
VPS54-201ENST00000272322 SFTA3P0C7M3 94 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 ALDH3B1P43353 468 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 MIDNQ504T8 468 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 TMEM182Q6ZP80 229 aaPredicted RBP14.29□□□□□ -0.12
VPS54-201ENST00000272322 RNASE11Q8TAA1 199 aaKnown RBP14.29□□□□□ -0.12
VPS54-201ENST00000272322 HPSE2Q8WWQ2 592 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 AQP10Q96PS8 301 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 DNTTIP1Q9H147 329 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 FZR1Q9UM11 496 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 CEP295Q9C0D2 2601 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 PLCE1Q9P212 2302 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 CDRT15L2A8MXV6 281 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 GPR37O15354 613 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 CYTIPO60759 359 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 TMEM187Q14656 261 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 C20orf204Q6ZNR8 217 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 FOXL2NBQ6ZUU3 175 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 ZNF695Q8IW36 515 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 TAAR9Q96RI9 348 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 ZNF703Q9H7S9 590 aaPredicted RBP14.29□□□□□ -0.12
VPS54-201ENST00000272322 RNASEK-C17orf49H0YIS7 233 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 YKT6O15498 198 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 DEDDO75618 318 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 CNOT4O95628 575 aaKnown RBP14.29□□□□□ -0.12
VPS54-201ENST00000272322 SNRNP70P08621 437 aaKnown RBP14.29□□□□□ -0.12
VPS54-201ENST00000272322 CELA3BP08861 270 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 LHX2P50458 406 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
VPS54-201ENST00000272322 TRBV6-7A0A0A0MS04 114 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 H7C2Y5 167 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 M0R036 132 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 TSPAN15O95858 294 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 PLA2G5P39877 138 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 EIF4E3Q8N5X7 224 aaKnown RBP14.28□□□□□ -0.12
VPS54-201ENST00000272322 CLRN3Q8NCR9 226 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 FAM213BQ8TBF2 198 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 TRAPPC2LH3BP13 241 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 CAMLGP49069 296 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 IDH3GP51553 393 aaPredicted RBP14.28□□□□□ -0.12
VPS54-201ENST00000272322 ABLIM2Q6H8Q1 611 aa14.28□□□□□ -0.12
VPS54-201ENST00000272322 FAM53AQ6NSI3 398 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms