RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 LRRC29Q8WV35 223 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 DYRK2Q92630 601 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 GINS4Q9BRT9 223 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 DPCDQ9BVM2 203 aaPredicted RBP11.9□□□□□ -0.5
SS18-201ENST00000269137 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
SS18-201ENST00000269137 GLS2Q9UI32 602 aa11.9□□□□□ -0.5
SS18-201ENST00000269137 POM121CA8CG34 1229 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 M0R233 179 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 WNT9BO14905 357 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 PEX14O75381 377 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 OR2H2O95918 312 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 PMP2P02689 132 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 IFNA6P05013 189 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 ZNF44P15621 663 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 LMO1P25800 156 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 MECP2P51608 486 aaKnown RBP11.89□□□□□ -0.51
SS18-201ENST00000269137 RAB25P57735 213 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 IDO2Q6ZQW0 420 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 Q8TCH9 128 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
SS18-201ENST00000269137 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 ALG5Q9Y673 324 aa11.89□□□□□ -0.51
SS18-201ENST00000269137 IGKV1D-8A0A087WSZ0 117 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 TRBV6-6A0A0A6YYG2 114 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 B9A039 149 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 IFNL4K9M1U5 179 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 HS3ST1O14792 307 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 HAND1O96004 215 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 PLAUP00749 431 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 LHBP01229 141 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 OR3A3P47888 321 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 CHRFAM7AQ494W8 412 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 FAM209AQ5JX71 171 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 OVCH2Q7RTZ1 564 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 LILRB1Q8NHL6 650 aaPredicted RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 RDH5Q92781 318 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 DHRS9Q9BPW9 319 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 GCM1Q9NP62 436 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ANXA10Q9UJ72 324 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 FLVCR2Q9UPI3 526 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ARFGEF3Q5TH69 2177 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 ARPC1BO15143 372 aaKnown RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 PRAF2O60831 178 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 NKX2-5P52952 324 aaPredicted RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 GMFBP60983 142 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 TESK1Q15569 626 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 GRK1Q15835 563 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 MST1LQ2TV78 715 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ZNF672Q499Z4 452 aaPredicted RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 PAN3Q58A45 887 aaKnown RBP11.88□□□□□ -0.51
SS18-201ENST00000269137 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 GCSAMQ8N6F7 178 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 OR13C8Q8NGS7 320 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 NPTNQ9Y639 398 aa11.88□□□□□ -0.51
SS18-201ENST00000269137 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 MYO18BQ8IUG5 2567 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 FAM221AA4D161 298 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 PYCARD-AS1I3L0S3 204 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 ATP6V1G1O75348 118 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 CSN2P05814 226 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 CDK10Q15131 360 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 SCGB2B2Q4G0G5 96 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 Q6ZPA2 131 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 TMEM17Q86X19 198 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 GAPTQ8N292 157 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 TERB2Q8NHR7 220 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 PIK3IP1Q96FE7 263 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 MED30Q96HR3 178 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 EGLN1Q9GZT9 426 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 PPA2Q9H2U2 334 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 GHITMQ9H3K2 345 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 Q9N2K0 584 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
SS18-201ENST00000269137 A0A0A6YYJ9 748 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 H7C1Q1 480 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 SIRPB1O00241 398 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 HSPB6O14558 160 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 IL5P05113 134 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 EGR1P18146 543 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 ARPC4P59998 168 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 SWI5Q1ZZU3 235 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 FAM222BQ8WU58 562 aa11.86□□□□□ -0.51
SS18-201ENST00000269137 ZNF486Q96H40 463 aaPredicted RBP11.86□□□□□ -0.51
SS18-201ENST00000269137 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms