RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MINOS1-NBL1R4GNA1 71 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 A0A0G2JK05 382 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 FAM90A22PA8MWA6 464 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 SIRPB1O00241 398 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 MPZL2O60487 215 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 ZFPL1O95159 310 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OR2H2O95918 312 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OPN1MWP04001 364 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OCM2P0CE71 109 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OCMP0CE72 109 aaPredicted RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 OPN1MW2P0DN77 364 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OPN1MW3P0DN78 364 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 JUNBP17275 347 aaPredicted RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 SNU13P55769 128 aaKnown RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 BLCAPP62952 87 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 HEPN1Q6WQI6 88 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 ZBTB49Q6ZSB9 765 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 TMEM219Q86XT9 240 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 C1QL4Q86Z23 238 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 SAXO1Q8IYX7 474 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 SYS1Q8N2H4 156 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OR5D18Q8NGL1 313 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OR5D14Q8NGL3 314 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OR13C3Q8NGS6 347 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 OR13C9Q8NGT0 318 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 WIPF2Q8TF74 440 aaPredicted RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 CORO2AQ92828 525 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 Q96MT0 163 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 SPACA5Q96QH8 159 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 MYCBPQ99417 103 aaPredicted RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 SLC29A1Q99808 456 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 ALG8Q9BVK2 526 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 CLEC7AQ9BXN2 247 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 COMMD4Q9H0A8 199 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 ZCCHC4Q9H5U6 513 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 ISG20L2Q9H9L3 353 aaKnown RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 RHOFQ9HBH0 211 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 AMBNQ9NP70 447 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 EXOSC4Q9NPD3 245 aaKnown RBP7.82□□□□□ -1.16
VPS41-201ENST00000265745 GMPPBQ9Y5P6 360 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 TGP01266 2768 aa7.82□□□□□ -1.16
VPS41-201ENST00000265745 TRGV10A0A0A0MS01 117 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 E9PI62 339 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 FADS2O95864 444 aaKnown RBP7.81□□□□□ -1.16
VPS41-201ENST00000265745 RPSAP08865 295 aaKnown RBP7.81□□□□□ -1.16
VPS41-201ENST00000265745 TMEM225BP0DP42 221 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 DBTP11182 482 aaKnown RBP7.81□□□□□ -1.16
VPS41-201ENST00000265745 CDK2P24941 298 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 HTR1DP28221 377 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 GLIPR1P48060 266 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 ZP1P60852 638 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 BDH1Q02338 343 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 SLC34A1Q06495 639 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 AESQ08117 197 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 CDK5R1Q15078 307 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 KISS1Q15726 138 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 Q6P435 159 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 BAIAP2L2Q6UXY1 529 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 TRAPPC6BQ86SZ2 158 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 SERPINA12Q8IW75 414 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 C10orf67Q8IYJ2 551 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 ABHD12Q8N2K0 398 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 PARP16Q8N5Y8 322 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 CHST4Q8NCG5 386 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 OR4P4Q8NGL7 312 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 NDNFQ8TB73 568 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 MRPL48Q96GC5 212 aaKnown RBP7.81□□□□□ -1.16
VPS41-201ENST00000265745 C9orf16Q9BUW7 83 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 PRSS22Q9GZN4 317 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 NEK6Q9HC98 313 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 INPP5EQ9NRR6 644 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 MRPS18AQ9NVS2 196 aaKnown RBP7.81□□□□□ -1.16
VPS41-201ENST00000265745 ERVK13-1Q9NX77 482 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 TAS2R3Q9NYW6 316 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 DPM3Q9P2X0 92 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 NOTCH3Q9UM47 2321 aa7.81□□□□□ -1.16
VPS41-201ENST00000265745 LOC100130705A0A1B0GUX0 176 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 ODAMA1E959 279 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 FUOMA2VDF0 154 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 TMEM212A6NML5 194 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 F2RL2O00254 374 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 DEGS1O15121 323 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 SULT1B1O43704 296 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 IGLV1-47P01700 117 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 CSN2P05814 226 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 CD28P10747 220 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 ZNF44P15621 663 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 CD34P28906 385 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 EMX1Q04741 257 aaPredicted RBP7.8□□□□□ -1.16
VPS41-201ENST00000265745 SCN1BQ07699 218 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 RAB40BQ12829 278 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 MRPL28Q13084 256 aaKnown RBP7.8□□□□□ -1.16
VPS41-201ENST00000265745 PRAMEF5Q5TYX0 476 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 CCDC121Q6ZUS5 278 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 RTN4RL2Q86UN3 420 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 OR5AK2Q8NH90 309 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 COQ2Q96H96 371 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 Q96M66 194 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms