RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 ATXN7O15265 892 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 SOCS1O15524 211 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 GABRG2P18507 467 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 PGCP20142 388 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 FXYD4P59646 89 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 TAF9Q16594 264 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 CD207Q9UJ71 328 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 IFNA21P01568 189 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 IL2RAP01589 272 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 RPS4XP62701 263 aaKnown RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 CLEC12BQ2HXU8 276 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 TMEM182Q6ZP80 229 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 SCRT1Q9BWW7 348 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 STRAPQ9Y3F4 350 aaKnown RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 TRAV36DV7A0A075B6V5 113 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 C22orf46C9J442 243 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 TNFSF13O75888 250 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 NXPH3O95157 252 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 GLRA1P23415 457 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 ZNF93P35789 620 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 OR1D5P58170 312 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-201ENST00000263071 TRIM61Q5EBN2 209 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 CSNK2A3Q8NEV1 391 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 OR52N5Q8NH56 324 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 ZNF596Q8TC21 504 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 CST9LQ9H4G1 147 aa12.42□□□□□ -0.42
SCARF1-201ENST00000263071 FRYQ5TBA9 3013 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 GZMHP20718 246 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 FAM57BQ71RH2 274 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 MCEMP1Q8IX19 187 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 ACY3Q96HD9 319 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 LRRC61Q9BV99 259 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 ANGPTL4Q9BY76 406 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 LIPGQ9Y5X9 500 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 YLPM1P49750 1951 aaKnown RBP12.41□□□□□ -0.42
SCARF1-201ENST00000263071 TRAV34A0A0B4J273 112 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 AHRRA9YTQ3 701 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 HSD17B6O14756 317 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
SCARF1-201ENST00000263071 EFNA3P52797 238 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 SP6Q3SY56 376 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 UNQ5815/PRO19632Q6UWF5 114 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 ZDHHC22Q8N966 263 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 RNF128Q8TEB7 428 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
SCARF1-201ENST00000263071 SMDT1Q9H4I9 107 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 SLC5A6Q9Y289 635 aa12.41□□□□□ -0.42
SCARF1-201ENST00000263071 OPN1MWP04001 364 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 OPN1MW2P0DN77 364 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 OPN1MW3P0DN78 364 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 OR3A4PP47883 348 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 SLC25A1P53007 311 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 FZD2Q14332 565 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 ZNF709Q8N972 641 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.42
SCARF1-201ENST00000263071 C2orf50Q96LR7 162 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 C20orf144Q9BQM9 153 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 RCL1Q9Y2P8 373 aaKnown RBP12.4□□□□□ -0.42
SCARF1-201ENST00000263071 B3GALT1Q9Y5Z6 326 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 NCOR1O75376 2440 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 TRIOBPQ9H2D6 2365 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 TRBV5-7A0A0A0MS05 114 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 RER1O15258 196 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 TAS2R31P59538 309 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 C20orf196Q8IYI0 205 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 PIGTQ969N2 578 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 EHFQ9NZC4 300 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 KLHL13Q9P2N7 655 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 ZNF735P0CB33 412 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 MMP9P14780 707 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 SGCZQ96LD1 299 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 SRD5A3Q9H8P0 318 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
SCARF1-201ENST00000263071 DOCK7Q96N67 2140 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 KIR2DS5A0A0G2JLQ3 304 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 A0A0G2JNG1 304 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 KIR2DS3K7RE56 304 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 RND3P61587 244 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 KIR2DS5Q14953 304 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
SCARF1-201ENST00000263071 ZNF440Q8IYI8 595 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 OR2AJ1Q8NGZ0 328 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 APH1AQ96BI3 265 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 BOD1Q96IK1 185 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 B4DEV8 164 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 NDUFB8O95169 186 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 VSIG8P0DPA2 414 aa12.39□□□□□ -0.43
SCARF1-201ENST00000263071 CD33P20138 364 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms