RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CABLES2Q9BTV7 478 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 ASCL3Q9NQ33 180 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 MYO7BQ6PIF6 2116 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 F5P12259 2224 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 F5H5K5 113 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 M0R143 59 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 OPN1LWP04000 364 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 THEGLP0DJG4 465 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 PNLIPP16233 465 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 MDKP21741 143 aaPredicted RBP13.01□□□□□ -0.33
XRCC1-201ENST00000262887 NKX2-1P43699 371 aaPredicted RBP13.01□□□□□ -0.33
XRCC1-201ENST00000262887 TDGF1P3P51864 188 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
XRCC1-201ENST00000262887 C17orf67Q0P5P2 114 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 MYBPHQ13203 477 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 FAM90A2PQ658T7 463 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 OR5L2Q8NGL0 311 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 OR4X1Q8NH49 305 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 CALHM2Q9HA72 323 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 PIGLQ9Y2B2 252 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 NKX2-6A6NCS4 301 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 DFFBO76075 338 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 OPN1MWP04001 364 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 OPN1MW2P0DN77 364 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 OPN1MW3P0DN78 364 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 FBXW4P57775 412 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 RUNX1Q01196 453 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 SLC25A47Q6Q0C1 308 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 OR10A7Q8NGE5 316 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 OR1P1Q8NH06 330 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 ANGPTL4Q9BY76 406 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 LYRM2Q9NU23 88 aaPredicted RBP13□□□□□ -0.33
XRCC1-201ENST00000262887 MRPS18CQ9Y3D5 142 aaKnown RBP13□□□□□ -0.33
XRCC1-201ENST00000262887 TDRD6O60522 2096 aaKnown RBP13□□□□□ -0.33
XRCC1-201ENST00000262887 SSSCA1O60232 199 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 CDS2O95674 445 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 IL18BPO95998 194 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 DTYMKP23919 212 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 DYNLT3P51808 116 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 VAMP2P63027 116 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 DCAF10Q5QP82 559 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF880Q6PDB4 577 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
XRCC1-201ENST00000262887 TMEM123Q8N131 208 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 DYRK2Q92630 601 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 TP53RKQ96S44 253 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 GLRX2Q9NS18 164 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 GNG13Q9P2W3 67 aa13□□□□□ -0.33
XRCC1-201ENST00000262887 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 ANGPTL7O43827 346 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 GCGP01275 180 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 METTL15P1P0C7V9 234 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 D2HGDHQ8N465 521 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 CCDC71LQ8N9Z2 235 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 HIPK2Q9H2X6 1198 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 RP1P56715 2156 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 FAM221AA4D161 298 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 CST7O76096 145 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 EPHA1P21709 976 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 THAP3Q8WTV1 239 aaPredicted RBP12.99□□□□□ -0.33
XRCC1-201ENST00000262887 LRRC61Q9BV99 259 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 V9GYS6 101 aa12.99□□□□□ -0.33
XRCC1-201ENST00000262887 TRAF3IP2O43734 574 aaPredicted RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 IGLV3-1P01715 115 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 THNSL2Q86YJ6 484 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 C20orf196Q8IYI0 205 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 IL17BQ9UHF5 180 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 TRDCB7Z8K6 153 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 EFNA2O43921 213 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 CEACAM1P13688 526 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 FOSL2P15408 326 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 MTCP1P56278 107 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 COL10A1Q03692 680 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 ABLIM2Q6H8Q1 611 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF385AQ96PM9 386 aaKnown RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 SRD5A3Q9H8P0 318 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 HERV-K104P61576 105 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 ZFP36L1Q07352 338 aaKnown RBP12.98□□□□□ -0.33
XRCC1-201ENST00000262887 TMEM92Q6UXU6 159 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF100Q8IYN0 542 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 MOB3AQ96BX8 217 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 CTDSP1Q9GZU7 261 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 CISD1Q9NZ45 108 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms