RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TRAV20A0A0B4J274 112 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 ANKRD30BLA7E2S9 258 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 FOXI3A8MTJ6 420 aaPredicted RBP11.15□□□□□ -0.62
SGCA-201ENST00000262018 ZNF780AO75290 641 aaPredicted RBP11.15□□□□□ -0.62
SGCA-201ENST00000262018 CSF1P09603 554 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 RAC2P15153 192 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 SELEP16581 610 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 RAD52P43351 418 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 GPR6P46095 362 aaPredicted RBP11.15□□□□□ -0.62
SGCA-201ENST00000262018 ACTBP60709 375 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 RPS23P62266 143 aaKnown RBP11.15□□□□□ -0.62
SGCA-201ENST00000262018 CDNFQ49AH0 187 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 Q6ZTK2 550 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 C1orf174Q8IYL3 243 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 CHST4Q8NCG5 386 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 OR5A2Q8NGI9 324 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 OR1J1Q8NGS3 322 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 OR10K1Q8NGX5 313 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 SLC25A40Q8TBP6 338 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 HPSE2Q8WWQ2 592 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 DUX5Q96PT3 197 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 OR2J1Q9GZK6 312 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 ZNF442Q9H7R0 627 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 DYNLRB1Q9NP97 96 aa11.15□□□□□ -0.62
SGCA-201ENST00000262018 MRPL15Q9P015 296 aaKnown RBP11.15□□□□□ -0.62
SGCA-201ENST00000262018 C7orf66A4D0T2 115 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 TMEM235A6NFC5 223 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
SGCA-201ENST00000262018 SERPINA2P20848 420 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 TMEM50BP56557 158 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 IL13RA1P78552 427 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 ZFP69Q49AA0 526 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 SPATA46Q5T0L3 261 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 BTN2A1Q7KYR7 527 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 OR51T1Q8NGJ9 327 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 OR5P3Q8WZ94 311 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 MED30Q96HR3 178 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 RNF170Q96K19 258 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 SELENOIQ9C0D9 397 aa11.14□□□□□ -0.63
SGCA-201ENST00000262018 ELL3Q9HB65 397 aaPredicted RBP11.14□□□□□ -0.63
SGCA-201ENST00000262018 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.14□□□□□ -0.63
SGCA-201ENST00000262018 IGKV1-12A0A0C4DH73 117 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 MFNGO00587 321 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 WNT9BO14905 357 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 SOCS1O15524 211 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 ANGPTL7O43827 346 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 HTR3BO95264 441 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 IGKV1D-12P01611 117 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 MT-ND4P03905 459 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 CPT2P23786 658 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 FPR2P25090 351 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 ERP29P30040 261 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 GLRXP35754 106 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 ERVS71-1P61550 626 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 CBX3Q13185 183 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 RSU1Q15404 277 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 PCGF3Q3KNV8 242 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 TMEM255AQ5JRV8 349 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 C1QL4Q86Z23 238 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 TMEM229BQ8NBD8 167 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 Q8NFD4 153 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 NANPQ8TBE9 248 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 UPRTQ96BW1 309 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 RAB3CQ96E17 227 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 MRPS24Q96EL2 167 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 MARS2Q96GW9 593 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 Q96M66 194 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 HIST1H2AAQ96QV6 131 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 ZMAT3Q9HA38 289 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 PCDHB16Q9NRJ7 776 aa11.13□□□□□ -0.63
SGCA-201ENST00000262018 ELF5Q9UKW6 265 aaPredicted RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 NOP16Q9Y3C1 178 aaKnown RBP11.13□□□□□ -0.63
SGCA-201ENST00000262018 RYR3Q15413 4870 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 OR5B21A6NL26 309 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 ZNF732B4DXR9 585 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 AKR7A2O43488 359 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 CSTBP04080 98 aaKnown RBP11.12□□□□□ -0.63
SGCA-201ENST00000262018 TCRBP04435 133 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 GTF2F2P13984 249 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 GNB3P16520 340 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 PRTN3P24158 256 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 RCVRNP35243 200 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 GPM6AP51674 278 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 ARL6IP1Q15041 203 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 PLAC9Q5JTB6 97 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 CD276Q5ZPR3 534 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms