RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR2T2Q6IF00 324 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 SLC25A47Q6Q0C1 308 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 BEND4Q6ZU67 534 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 SLC25A26Q70HW3 274 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 SLC25A45Q8N413 288 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 CALHM2Q9HA72 323 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 NSG2Q9Y328 171 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 IGKV1D-13A0A0B4J2D9 117 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 NPIPA2E9PIF3 369 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 NPIPA3F8WFD2 350 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 PGA5P0DJD9 388 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 IGKV1-13P0DP09 117 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 LYL1P12980 280 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HOXA6P31267 233 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
SNX1-201ENST00000261889 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 GPR137CQ8N3F9 429 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HAS2Q92819 552 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ULBP2Q9BZM5 246 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 LMAN1LQ9HAT1 526 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 SLC7A10Q9NS82 523 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 P2RY1P47900 373 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 HERV-K104P61576 105 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ZNF501Q96CX3 271 aaPredicted RBP11.24□□□□□ -0.61
SNX1-201ENST00000261889 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 TAAR5O14804 337 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 PHOX2AO14813 284 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 CNOT4O95628 575 aaKnown RBP11.23□□□□□ -0.61
SNX1-201ENST00000261889 CCL3P10147 92 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 NDUFB7P17568 137 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 GALNSP34059 522 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
SNX1-201ENST00000261889 S100A12P80511 92 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 GNMTQ14749 295 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 FAM53AQ6NSI3 398 aaPredicted RBP11.23□□□□□ -0.61
SNX1-201ENST00000261889 ST8SIA1Q92185 356 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 FRZBQ92765 325 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 Q96M66 194 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 DEFB126Q9BYW3 111 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 MYOTQ9UBF9 498 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 A0A0G2JMM0 328 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 A0A1W2PPB8 328 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 A0A1W2PRS3 328 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 KIR3DP1A8MWS1 328 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 SCRG1O75711 98 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 CTSDP07339 412 aaPredicted RBP11.23□□□□□ -0.61
SNX1-201ENST00000261889 PTGDSP41222 190 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 FAM3AP98173 230 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 RTP5Q14D33 572 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 GPR157Q5UAW9 335 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 PLCXD3Q63HM9 321 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 OR2C3Q8N628 320 aa11.23□□□□□ -0.61
SNX1-201ENST00000261889 K7ESF4 209 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 IFNA17P01571 189 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 MSR1P21757 451 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 HTR5AP47898 357 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 ZNF695Q8IW36 515 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 LGI3Q8N145 548 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 GAPTQ8N292 157 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 RASL10BQ96S79 203 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 FUT3P21217 361 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 AFF3P51826 1226 aaKnown RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 SRYQ05066 204 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 ELOBQ15370 118 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 GUSBP11Q6P575 273 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 EGLN1Q9GZT9 426 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 GAR1Q9NY12 217 aaKnown RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 CADP27708 2225 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 ZNF705GA8MUZ8 300 aaPredicted RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 HS3ST1O14792 307 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms