RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 WNT5BQ9H1J7 359 aa16.69■□□□□ 0.26
SCARB1-201ENST00000261693 SEBOXQ9HB31 216 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-201ENST00000261693 HS3ST3B1Q9Y662 390 aa16.69■□□□□ 0.26
SCARB1-201ENST00000261693 LOC102723996A0A087X1L8 192 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 HSPB6O14558 160 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 CST7O76096 145 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 FUT3P21217 361 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 NKX2-1P43699 371 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-201ENST00000261693 UCP3P55916 312 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 RPS23P62266 143 aaKnown RBP16.68■□□□□ 0.26
SCARB1-201ENST00000261693 NCMAPQ5T1S8 102 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF695Q8IW36 515 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 SPEM1Q8N4L4 309 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 KDF1Q8NAX2 398 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-201ENST00000261693 DUSP23Q9BVJ7 150 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 OR2H1Q9GZK4 316 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF727A8MUV8 499 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 TRDCB7Z8K6 153 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 CXCL13O43927 109 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 CLN5O75503 358 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 CBR3O75828 277 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 OR2C1O95371 312 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 IGHV2-5P01817 119 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 RAC3P60763 192 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 HAGHQ16775 308 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 NTNG2Q96CW9 530 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 FOXB1Q99853 325 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF700Q9H0M5 742 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 TMEM222Q9H0R3 208 aa16.68■□□□□ 0.26
SCARB1-201ENST00000261693 FBP1P09467 338 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 WDFY4Q6ZS81 3184 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 ADAM20O43506 726 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 KLF7O75840 302 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-201ENST00000261693 EDN3P14138 238 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 TMEM211Q6ICI0 200 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 DPPA2Q7Z7J5 298 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 OR5C1Q8NGR4 320 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 NAT6Q93015 286 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 WDR54Q9H977 334 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 MMP24Q9Y5R2 645 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 FAM186AA6NE01 2351 aa16.67■□□□□ 0.26
SCARB1-201ENST00000261693 TRAV20A0A0B4J274 112 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 RBFOX3A6NFN3 312 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 PROB1E7EW31 1015 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 CCL4P13236 92 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 PMELP40967 661 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 B3GALT5-AS1P59052 145 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 RUNX1Q01196 453 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF818PQ6ZRF7 136 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 LFNGQ8NES3 379 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 CPT1CQ8TCG5 803 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SH2D2AQ9NP31 389 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 GLRX2Q9NS18 164 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 MIOXQ9UGB7 285 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 ATXN7O15265 892 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-201ENST00000261693 KLK3P07288 261 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SCTP09683 121 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 RFPL3SP0C7P2 107 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF266Q14584 549 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 EXT1Q16394 746 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SLC23A3Q6PIS1 610 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 GAPTQ8N292 157 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SAP25Q8TEE9 199 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 EXTL1Q92935 676 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SF3B5Q9BWJ5 86 aaKnown RBP16.66■□□□□ 0.26
SCARB1-201ENST00000261693 PAPOLGQ9BWT3 736 aaKnown RBP16.66■□□□□ 0.26
SCARB1-201ENST00000261693 C11orf1Q9H5F2 150 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 IL36GQ9NZH8 169 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF816-ZNF321PA0A0X1KG74 233 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 ZNF716A6NP11 495 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 AP4M1O00189 453 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 CCNOP22674 350 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 RND3P61587 244 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 SPSB3Q6PJ21 355 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 TMEM252Q8N6L7 170 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 DOCK7Q96N67 2140 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 LIPGQ9Y5X9 500 aa16.66■□□□□ 0.26
SCARB1-201ENST00000261693 GJE1A6NN92 205 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 HSD17B6O14756 317 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 TRAPPC6AO75865 159 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 CDS2O95674 445 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 SPINK2P20155 84 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 RPS10P46783 165 aaKnown RBP16.65■□□□□ 0.26
SCARB1-201ENST00000261693 DYNLT3P51808 116 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 GGNQ86UU5 652 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 SELENOHQ8IZQ5 122 aaKnown RBP16.65■□□□□ 0.26
SCARB1-201ENST00000261693 PARPBPQ9NWS1 579 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 IL36RNQ9UBH0 155 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 K7ESF4 209 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 TNFSF12O43508 249 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 TMEM50AO95807 157 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 BCL3P20749 454 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 EPHA1P21709 976 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 VAMP2P63027 116 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 KRTAP27-1Q3LI81 207 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 PLEKHF2Q9H8W4 249 aa16.65■□□□□ 0.26
SCARB1-201ENST00000261693 IGKV1D-13A0A0B4J2D9 117 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 H0YL77 283 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms