RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 A8MV72 311 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 H0Y980 276 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 NRG2O14511 850 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 FBXO24O75426 580 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 HIST1H1BP16401 226 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TPPP2P59282 170 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ROBO4Q8WZ75 1007 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TRBV5-5A0A0J9YX44 114 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 A0A1W2PNR3 127 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MGST3O14880 152 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LINC01565O15544 149 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SLC25A6P12236 298 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CBR1P16152 277 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 GZMMP51124 257 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PWWP2BQ6NUJ5 590 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SIGLECL1Q8N7X8 197 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF680Q8NEM1 530 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PITX3O75364 302 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SLC2A10O95528 541 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PDGFBP01127 241 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PAFAH1B2P68402 229 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CSRP2Q16527 193 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 C1orf100Q5SVJ3 147 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LIAT1Q6ZQX7 453 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF501Q96CX3 271 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 IGSF23A1L1A6 192 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PPP1R17O96001 155 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SEC11BP0C7V7 166 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CEACAM1P13688 526 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CCKARP32238 428 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 POLR2IP36954 125 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MOGAT2Q3SYC2 334 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LSM10Q969L4 123 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM7Q9BQ49 75 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR2J1Q9GZK6 312 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 COL4A6Q14031 1691 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR2A4O95047 310 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SNRNP70P08621 437 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PDZK1IP1Q13113 114 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 HOGA1Q86XE5 327 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SUMF1Q8NBK3 374 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SCMH1Q96GD3 660 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR2A7Q96R45 310 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 BANF2Q9H503 90 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 Q9N2K0 584 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PLXNA2O75051 1894 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ACACBO00763 2458 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 FAHP16930 419 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TIAL1Q01085 375 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF574Q6ZN55 896 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PECRQ9BY49 303 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MT-ND6P03923 174 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LIPFP07098 398 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 GNB3P16520 340 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZFP36L2P47974 494 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 KCNMB1Q16558 191 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 FAM214BQ7L5A3 538 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 RTN4RL2Q86UN3 420 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR2C3Q8N628 320 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR2Z1Q8NG97 314 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PTPMT1Q8WUK0 201 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LPAR2Q9HBW0 351 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MED29Q9NX70 200 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 RPL36A-HNRNPH2H7BZ11 118 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MOSPD3O75425 235 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CXorf1O96002 111 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CD3DP04234 171 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CEACAM6P40199 344 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 FGF12P61328 243 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CADM3Q8N126 398 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM230Q96A57 120 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MYEOVQ96EZ4 313 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 EMC6Q9BV81 110 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TMPRSS5Q9H3S3 457 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SAP30LQ9HAJ7 183 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CXorf65A6NEN9 183 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 NME2P1O60361 137 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 B4GALT3O60512 393 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 HPRT1P00492 218 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 NME2P22392 152 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 LIMS1P48059 325 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SULT1A1P50225 295 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SLC35B1P78383 322 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 DEFA6Q01524 100 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF362Q5T0B9 420 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CD200R1LQ6Q8B3 271 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR4A5Q8NH83 315 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 GPR137Q96N19 417 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ALKBH3Q96Q83 286 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CABLES2Q9BTV7 478 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ACAA2P42765 397 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 DLK1P80370 383 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR8B12Q8NGG6 310 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SAP25Q8TEE9 199 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SF3B6Q9Y3B4 125 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SEMA7AO75326 666 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PRF1P14222 555 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms