RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 F5H768 121 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 H0Y9J4 135 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 I3L521 148 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 J3QLI3 93 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 RAD51CO43502 376 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SSNA1O43805 119 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SPAG7O75391 227 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TNFSF15O95150 251 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 GCGP01275 180 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 IGF2P01344 180 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 C8GP07360 202 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 LIMS3P0CW19 117 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 LIMS4P0CW20 117 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TBPP20226 339 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 AK4P27144 223 aaPredicted RBP2.97□□□□□ -1.93
CCDC54-201ENST00000261058 HTR1DP28221 377 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 HRH1P35367 487 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 HCCSP53701 268 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 APOC4P55056 127 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 CDKN2DP55273 166 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 RHOAP61586 193 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SELENOTP62341 195 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 CD164Q04900 197 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 PRKCDQ05655 676 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 GGTLC2Q14390 218 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DS1Q14954 304 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 NSDHLQ15738 373 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ARHGAP11BQ3KRB8 267 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 FAM71E1Q6IPT2 247 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TRIM40Q6P9F5 258 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 HAGHLQ6PII5 290 aaPredicted RBP2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SMARCD3Q6STE5 483 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 OLIG3Q7RTU3 272 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SLC16A13Q7RTY0 426 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 C6orf223Q8N319 242 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 METTL13Q8N6R0 699 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 WDR31Q8NA23 367 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 LINC01555Q8NAE3 123 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SLC26A10Q8NG04 563 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 OR8U1Q8NH10 309 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 OR4C6Q8NH72 309 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TERB2Q8NHR7 220 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF502Q8TBZ5 544 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SFXN5Q8TD22 340 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 OR5P2Q8WZ92 322 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 RCN3Q96D15 328 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF681Q96N22 645 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF382Q96SR6 550 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 CCDC32Q9BV29 185 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TBL1XR1Q9BZK7 514 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 TXNIPQ9H3M7 391 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 UBE2ZQ9H832 354 aaPredicted RBP2.97□□□□□ -1.93
CCDC54-201ENST00000261058 RDH14Q9HBH5 336 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 WFDC1Q9HC57 220 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 CNTNAP1P78357 1384 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 UACAQ9BZF9 1416 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 CAMSAP1Q5T5Y3 1602 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 SMARCA4P51532 1647 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 FGD6Q6ZV73 1430 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 C20orf202A1L168 122 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 IGSF23A1L1A6 192 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 PRORSD1PA6NEY8 169 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SIGLEC16A6NMB1 481 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 M0R143 59 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 GPR31O00270 319 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SLC16A7O60669 478 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SCO1O75880 301 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 S1PR2O95136 353 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 IFNA1P01562 189 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 CD8AP01732 235 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 C1QCP02747 245 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 CD74P04233 296 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 TRAPPC2P0DI81 140 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 TRAPPC2BP0DI82 140 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RBMY1CP0DJD4 496 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 HIST1H1EP10412 219 aaKnown RBP2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RAB5AP20339 215 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 OMGP23515 440 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 HTR1FP30939 366 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 DRD3P35462 400 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 GGT2P36268 569 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 KIR2DS4P43632 304 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 KLK7P49862 253 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RORCP51449 518 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RAB25P57735 213 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 OR10A3P58181 314 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 TBPL1P62380 186 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RPL18AQ02543 176 aaKnown RBP2.96□□□□□ -1.94
CCDC54-201ENST00000261058 EMX1Q04741 257 aaPredicted RBP2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SKP2Q13309 424 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 TAF9Q16594 264 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SPIN4Q56A73 249 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SCIMPQ6UWF3 145 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 RFLNAQ6ZTI6 216 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 TMEM150AQ86TG1 271 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 COMMD7Q86VX2 200 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 NIT1Q86X76 327 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 PIANPQ8IYJ0 282 aa2.96□□□□□ -1.94
CCDC54-201ENST00000261058 SLC35F6Q8N357 371 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms