RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 HIST1H2BAQ96A08 127 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 Q96M66 194 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 SMOC1Q9H4F8 434 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ABI3Q9P2A4 366 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 B4GALT7Q9UBV7 327 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 MIOXQ9UGB7 285 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CARHSP1Q9Y2V2 147 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 TMED3Q9Y3Q3 217 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 WSB1Q9Y6I7 421 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 A0A087WZY1 265 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 A0A0U1RQV5 110 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 PATE3B3GLJ2 98 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 C9JQL5 133 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 PPP1R2P9O14990 202 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CHST1O43916 411 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 YIF1AO95070 293 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 IGLV3-19P01714 112 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 LIFP15018 202 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 APLNRP35414 380 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 P2RY1P47900 373 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 RAB5CP51148 216 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 FGF8P55075 233 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 ADIRFQ15847 76 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 C5orf24Q7Z6I8 188 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TDHQ8IZJ6 230 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 OR10J5Q8NHC4 309 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 RHBDD1Q8TEB9 315 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF488Q96MN9 340 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 PLEKHF2Q9H8W4 249 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CCL28Q9NRJ3 127 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 RFNGQ9Y644 331 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 PCDH15Q96QU1 1955 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF407Q9C0G0 2248 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 A0A0U1RQK1 487 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 KIR2DS1A0A191URI9 304 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 NPIPB13A6NJU9 1138 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 NPIPB4C9JG80 1138 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF587BE7ETH6 402 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 SIRPB1O00241 398 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TERTO14746 1132 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 LAMTOR5O43504 91 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 FBP1P09467 338 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 METTL15P1P0C7V9 234 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 FAM157CP0CG43 387 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF17P17021 662 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 KIR2DS4P43632 304 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 DUSP3P51452 185 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 DYNLT3P51808 116 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 RAC3P60763 192 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ARF1P84077 181 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 FAM3AP98173 230 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 PSG4Q00888 419 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 KIR2DS1Q14954 304 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF429Q86V71 674 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF808Q8N4W9 903 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF709Q8N972 641 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 OR2V1Q8NHB1 315 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 NINJ1Q92982 152 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 THOC3Q96J01 351 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 SMIM8Q96KF7 97 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 SRXN1Q9BYN0 137 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ERRFI1Q9UJM3 462 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 RNF150Q9ULK6 438 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TRBV23-1A0A0A0MS06 115 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 RBFOX3A6NFN3 312 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DBX1A6NMT0 343 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 GAPDHP04406 335 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 GRPP07492 148 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SCTP09683 121 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 MDKP21741 143 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 IL13RA2Q14627 380 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 KIAA2026Q5HYC2 2103 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TMEM164Q5U3C3 297 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ZNF468Q5VIY5 522 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SPINK14Q6IE38 97 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ZDHHC23Q8IYP9 409 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 UBAC2Q8NBM4 344 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 INTS12Q96CB8 462 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 TP53RKQ96S44 253 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ABHD14AQ9BUJ0 271 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TGIF2Q9GZN2 237 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CHRNA10Q9GZZ6 450 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TMEM38BQ9NVV0 291 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 BOKQ9UMX3 212 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 GAB2Q9UQC2 676 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 STARD10Q9Y365 291 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CHCHD2Q9Y6H1 151 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 NUP210Q8TEM1 1887 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 ZNF705GA8MUZ8 300 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 H0YL77 283 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 HBE1P02100 147 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 BCL3P20749 454 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DTYMKP23919 212 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 HOXC12P31275 282 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SNCAP37840 140 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms