RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RPL7L1Q6DKI1 246 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 TMEM178AQ8NBL3 297 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 OTX1P32242 354 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 APLNRP35414 380 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 SSBP1Q04837 148 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 RDH5Q92781 318 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 HIST1H2AAQ96QV6 131 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 CYTL1Q9NRR1 136 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 ACAA1P09110 424 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 PRF1P14222 555 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 CCL1P22362 96 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 F2RL1P55085 397 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 MALLQ13021 153 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 PRDX4Q13162 271 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 CRIP3Q6Q6R5 217 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 MFNGO00587 321 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 FGF16O43320 207 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 DNPH1O43598 174 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 S100A6P06703 90 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 RAB32Q13637 225 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 CLINT1Q14677 625 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 PEA15Q15121 130 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 SLC22A25Q6T423 547 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 MDP1Q86V88 176 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 ASB13Q8WXK3 278 aa12.62□□□□□ -0.39
TRAFD1-201ENST00000257604 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 A6NJ64 397 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 M0R036 132 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 ARG1P05089 322 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 FAM157CP0CG43 387 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 TNFSF10P50591 281 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 OR10C1Q96KK4 312 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 ABCA4P78363 2273 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 AKAP6Q13023 2319 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 hCG_1809904A0A1W2PP81 198 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 A0A1W2PR64 198 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 A0A1W2PRV1 198 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 TERTO14746 1132 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 KLK10O43240 276 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 C1QL1O75973 258 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 SFTA3P0C7M3 94 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 BCL3P20749 454 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 LPAR6P43657 344 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 FHITP49789 147 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 OSR2Q8N2R0 312 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 OR10AD1Q8NGE0 317 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 PTX4Q96A99 478 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 C5orf66Q9H5L9 145 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 AMDHD2Q9Y303 409 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 SPTBN1Q01082 2364 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 ZNF816-ZNF321PA0A0X1KG74 233 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 TNFSF12O43508 249 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 UBE2NP61088 152 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 SMCO1Q147U7 214 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 CA5BP1Q8WTZ4 195 aa12.61□□□□□ -0.39
TRAFD1-201ENST00000257604 hCG_38984A0A1B0GV85 526 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 A6NLC8 198 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 SYNGR1O43759 233 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 NXPH3O95157 252 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 DUS4LO95620 317 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 IL2RAP01589 272 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 CTSSP25774 331 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 HIST1H3AP68431 136 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 HIST2H3PS2Q5TEC6 136 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 HIST2H3AQ71DI3 136 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 MDS2Q8NDY4 140 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 IL1F10Q8WWZ1 152 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 GRPP07492 148 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 RNF224P0DH78 156 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 OR5H8P0DN80 308 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 RIPPLY2Q5TAB7 128 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 ADAM5Q6NVV9 412 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 OR5L1Q8NGL2 311 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 IP6K3Q96PC2 410 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 MMP26Q9NRE1 261 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
TRAFD1-201ENST00000257604 NQO2P16083 231 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 CLEC18BQ6UXF7 455 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 SLC30A7Q8NEW0 376 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms