RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CFIP05156 583 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 KLK3P07288 261 aaPredicted RBP10.39□□□□□ -0.75
USHBP1-201ENST00000252597 IFI6P09912 130 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 P2RY1P47900 373 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 OSR2Q8N2R0 312 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 OR6X1Q8NH79 312 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 RSG1Q9BU20 258 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 CALHM2Q9HA72 323 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 AURKAIP1Q9NWT8 199 aaPredicted RBP10.39□□□□□ -0.75
USHBP1-201ENST00000252597 TP53I11O14683 189 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 CHST1O43916 411 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 CXCL1P09341 107 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 FAM3AP98173 230 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 ZP4Q12836 540 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
USHBP1-201ENST00000252597 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 HLA-CQ95604 372 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 SPACA9Q96E40 222 aaPredicted RBP10.39□□□□□ -0.75
USHBP1-201ENST00000252597 POM121Q96HA1 1249 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 CHST5Q9GZS9 411 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 OR51M1Q9H341 326 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 PRR14LQ5THK1 2151 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 IGSF23A1L1A6 192 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 CEBPZOSA8MTT3 80 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 SCTP09683 121 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 THBS4P35443 961 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 HAAOP46952 286 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 S100A12P80511 92 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 HGFACQ04756 655 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 HMGN3Q15651 99 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 ADIRFQ15847 76 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 TBC1D26Q86UD7 250 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
USHBP1-201ENST00000252597 GAPTQ8N292 157 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 OR2M3Q8NG83 312 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 EDARADDQ8WWZ3 215 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 CCL28Q9NRJ3 127 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 IGKV1-27A0A075B6S5 117 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 TK1P04183 234 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 OTX2P32243 289 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 TMEM187Q14656 261 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 CEACAM16Q2WEN9 425 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 AAED1Q7RTV5 226 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 RPUSD4Q96CM3 377 aaKnown RBP10.38□□□□□ -0.75
USHBP1-201ENST00000252597 PNRC2Q9NPJ4 139 aaKnown RBP10.38□□□□□ -0.75
USHBP1-201ENST00000252597 UFSP2Q9NUQ7 469 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 A0A087WZY1 265 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 BCAT2O15382 392 aaPredicted RBP10.38□□□□□ -0.75
USHBP1-201ENST00000252597 SLC34A2O95436 690 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 SERPINE2P07093 398 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 METTL15P1P0C7V9 234 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 CFPP27918 469 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 GPM6AP51674 278 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 PYY3Q5JQD4 70 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 C10orf91Q5T1B1 145 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 D2HGDHQ8N465 521 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF611Q8N823 705 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF610Q8N9Z0 462 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 CCDC71LQ8N9Z2 235 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 PP6455Q8WZ26 134 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
USHBP1-201ENST00000252597 A0A1B0GV90 55 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 UBE2CO00762 179 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 PPYP01298 95 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 TCN2P20062 427 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF133P52736 654 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-201ENST00000252597 DPPA2Q7Z7J5 298 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 CALHM1Q8IU99 346 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 Q8WTZ3 238 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 BCO1Q9HAY6 547 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 OCIAD1Q9NX40 245 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 IFNA5P01569 189 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 HEXAP06865 529 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 SEC11BP0C7V7 166 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 GLB1P16278 677 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF92Q03936 586 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ENDOGQ14249 297 aaKnown RBP10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF266Q14584 549 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 CNN3Q15417 329 aaKnown RBP10.37□□□□□ -0.75
USHBP1-201ENST00000252597 SLC23A3Q6PIS1 610 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 CA5BP1Q8WTZ4 195 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 EXTL1Q92935 676 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 PLPPR2Q96GM1 343 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 Q96M66 194 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF665Q9H7R5 613 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
USHBP1-201ENST00000252597 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
USHBP1-201ENST00000252597 AGAP20933 346 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 SPATA46Q5T0L3 261 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 TMEM252Q8N6L7 170 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms