RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ZNF19P17023 458 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 ARHGDIBP52566 201 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 BDH1Q02338 343 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 MED21Q13503 144 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 HEPN1Q6WQI6 88 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 Q6ZS46 218 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 OR13C3Q8NGS6 347 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 RFT1Q96AA3 541 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 AKR1E2Q96JD6 320 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 COMMD4Q9H0A8 199 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 IGKV1-12A0A0C4DH73 117 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 MAGEA13PA6NCF6 341 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 LEUTXA8MZ59 168 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 IGKV1D-12P01611 117 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 CDK2P24941 298 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 AESQ08117 197 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 SAXO1Q8IYX7 474 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 OR13C9Q8NGT0 318 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 CAPSLQ8WWF8 208 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 CREB3L1Q96BA8 519 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 OCSTAMPQ9BR26 566 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 C9orf16Q9BUW7 83 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 ZCCHC4Q9H5U6 513 aa16.89■□□□□ 0.29
NEDD8-201ENST00000250495 EXOGQ9Y2C4 368 aaKnown RBP16.89■□□□□ 0.29
NEDD8-201ENST00000250495 OR4C45A6NMZ5 311 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 ZNF44P15621 663 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 SCN1BQ07699 218 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 ALKBH1Q13686 389 aaKnown RBP16.88■□□□□ 0.29
NEDD8-201ENST00000250495 OXLD1Q5BKU9 147 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 PRAMEF5Q5TYX0 476 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 CHST4Q8NCG5 386 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 OR5AU1Q8NGC0 362 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 OR51A4Q8NGJ6 313 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 OR10AC1Q8NH08 325 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 PELI1Q96FA3 418 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 C4orf36Q96KX1 117 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 LIN7BQ9HAP6 207 aa16.88■□□□□ 0.29
NEDD8-201ENST00000250495 ADARB2-AS1A8MUL3 147 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 TOR1AO14656 332 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 PRB2P02812 416 aaPredicted RBP16.87■□□□□ 0.29
NEDD8-201ENST00000250495 CSN2P05814 226 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 CEACAM3P40198 252 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 GLIPR1P48060 266 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 PRRX1P54821 245 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 ZIK1Q3SY52 487 aaPredicted RBP16.87■□□□□ 0.29
NEDD8-201ENST00000250495 CENPVQ7Z7K6 275 aaPredicted RBP16.87■□□□□ 0.29
NEDD8-201ENST00000250495 OR4D6Q8NGJ1 314 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 OR5D18Q8NGL1 313 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 OR5D14Q8NGL3 314 aa16.87■□□□□ 0.29
NEDD8-201ENST00000250495 ODAMA1E959 279 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 EI24O14681 340 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 DEGS1O15121 323 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 ALX3O95076 343 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 IGLV1-47P01700 117 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 CD34P28906 385 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 ALDH3A2P51648 485 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 CD83Q01151 205 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 TMEM95Q3KNT9 176 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 KRBOX4Q5JUW0 171 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 Q6P435 159 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 SERPINA12Q8IW75 414 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 SGCDQ92629 289 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 LGALS12Q96DT0 336 aa16.86■□□□□ 0.29
NEDD8-201ENST00000250495 E9PQ18 207 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 HCKP08631 526 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 TMEM225BP0DP42 221 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 DBTP11182 482 aaKnown RBP16.85■□□□□ 0.29
NEDD8-201ENST00000250495 CD24P25063 80 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 PTGFRP43088 359 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 GALEQ14376 348 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 BAIAP2L2Q6UXY1 529 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 Q6ZPA2 131 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 RNF144BQ7Z419 303 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 LHFPL3Q86UP9 236 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 SYS1Q8N2H4 156 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 SLC25A33Q9BSK2 321 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 ALG8Q9BVK2 526 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 NECAP2Q9NVZ3 263 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 OR6C3Q9NZP0 311 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 SCOCQ9UIL1 159 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 MYRFQ9Y2G1 1151 aa16.85■□□□□ 0.29
NEDD8-201ENST00000250495 ZNF729A6NN14 1252 aaPredicted RBP16.84■□□□□ 0.29
NEDD8-201ENST00000250495 BUB1B-PAK6H3BSN5 160 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 SLC33A1O00400 549 aaPredicted RBP16.84■□□□□ 0.29
NEDD8-201ENST00000250495 MRPL28Q13084 256 aaKnown RBP16.84■□□□□ 0.29
NEDD8-201ENST00000250495 KISS1Q15726 138 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 HLA-DRB5Q30154 266 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 WFDC9Q8NEX5 89 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 Q96MT0 163 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 RBM14Q96PK6 669 aaKnown RBP16.84■□□□□ 0.29
NEDD8-201ENST00000250495 ZNF286AQ9HBT8 521 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 ING3Q9NXR8 418 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 GMPPBQ9Y5P6 360 aa16.84■□□□□ 0.29
NEDD8-201ENST00000250495 A0A087X0M5 115 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 A0A1B0GX30 115 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 FAM172BPA6NC97 362 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 OOSP1A8MZH6 123 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 PIN1P1O15428 100 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 SULT1B1O43704 296 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms