RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LGI3Q8N145 548 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 LOXL4Q96JB6 756 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 C12orf49Q9H741 205 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 PLSCR2Q9NRY7 297 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 HSPB6O14558 160 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 SYNGR1O43759 233 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 MED6O75586 246 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 NAPSAO96009 420 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 GAPDHP04406 335 aaKnown RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 GNRHRP30968 328 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 SULT1A2P50226 295 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 ESPL1Q14674 2120 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 HIKESHIQ53FT3 197 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 ADAT1Q9BUB4 502 aaKnown RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 PLEKHA2Q9HB19 425 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 Q9N2K0 584 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 RCC2Q9P258 522 aaKnown RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 KLF13Q9Y2Y9 288 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 CD300LBA8K4G0 201 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 E5RGE8 158 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 JTBO76095 146 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 SCTP09683 121 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 DUSP1P28562 367 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 WNT5AP41221 380 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 C10orf91Q5T1B1 145 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 EIF5AL1Q6IS14 154 aaKnown RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 Q6ZS49 121 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 MCEMP1Q8IX19 187 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 SLC35G3Q8N808 338 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 ZDHHC8Q9ULC8 765 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 NSG2Q9Y328 171 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM96BQ9Y3D0 163 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM186AA6NE01 2351 aa16.74■□□□□ 0.27
CDC42EP1-201ENST00000249014 KLRC4-KLRK1H3BQV0 150 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 ZNF169Q14929 603 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 HERPUD1Q15011 391 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 TSC22D1Q15714 1073 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 MEX3BQ6ZN04 569 aaKnown RBP16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 CCDC71LQ8N9Z2 235 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 TLNRD1Q9H1K6 362 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 DEFB127Q9H1M4 99 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 OR51B6Q9H340 312 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 R4GN57 208 aa16.73■□□□□ 0.27
CDC42EP1-201ENST00000249014 C3orf85A0A1B0GTC6 90 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 C3orf80F5H4A9 247 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 F8W036 122 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 MPPED1O15442 326 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 IL18BPO95998 194 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 BLOC1S1P78537 153 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 PLP2Q04941 152 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 SVBPQ8N300 66 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 ZFP62Q8NB50 900 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 OR5A2Q8NGI9 324 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 RHOFQ9HBH0 211 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 TREM1Q9NP99 234 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 UQCC1Q9NVA1 299 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 TRAPPC2LH3BP13 241 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 F12P00748 615 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 MUC1P15941 1255 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 ID4P47928 161 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 KCNJ3P48549 501 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 SLC10A1Q14973 349 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 RNFT1Q5M7Z0 435 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 FBXW12Q6X9E4 464 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 LDLRAD3Q86YD5 345 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 MKXQ8IYA7 352 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 OR5P3Q8WZ94 311 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 FER1L6-AS2Q96M78 137 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 ZNF488Q96MN9 340 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM86C1Q9NVL1 165 aa16.72■□□□□ 0.27
CDC42EP1-201ENST00000249014 TOR1AO14656 332 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 CAV2P51636 162 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 TGIF1Q15583 401 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 MPV17LQ2QL34 196 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 HAGHLQ6PII5 290 aaPredicted RBP16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 IL22RA1Q8N6P7 574 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 UBAC2Q8NBM4 344 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 GPHA2Q96T91 129 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 WFDC1Q9HC57 220 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 CARHSP1Q9Y2V2 147 aaKnown RBP16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 SRSF7Q16629 238 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 BTNL8Q6UX41 500 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 DPPA2Q7Z7J5 298 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 SECTM1Q8WVN6 248 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 IP6K3Q96PC2 410 aa16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 FBXO9Q9UK97 447 aaPredicted RBP16.71■□□□□ 0.27
CDC42EP1-201ENST00000249014 IGKV1-6A0A0C4DH72 117 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 PRKACAP17612 351 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 IGFBP7Q16270 282 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 ZNF818PQ6ZRF7 136 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 TBC1D26Q86UD7 250 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 DMBX1Q8NFW5 382 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR4D5Q8NGN0 318 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 OR1K1Q8NGR3 316 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 NEK7Q8TDX7 302 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 WDYHV1Q96HA8 205 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 HIST1H2AAQ96QV6 131 aa16.7■□□□□ 0.26
CDC42EP1-201ENST00000249014 TMEM222Q9H0R3 208 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms