RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GTF3AQ92664 365 aaKnown RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ABHD17AQ96GS6 310 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 OR10C1Q96KK4 312 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 SCNM1Q9BWG6 230 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 IFT22Q9H7X7 185 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 WASF3Q9UPY6 502 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 SPTBN2O15020 2390 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ANKRD11Q6UB99 2663 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 A0A0D9SG52 128 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 TEX13DA0A0J9YY54 714 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 HS3ST1O14792 307 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 AADACP22760 399 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 GLP1RP43220 463 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 UCP3P55916 312 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ZNF345Q14585 488 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ATXN7L3Q14CW9 347 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 KRTCAP3Q53RY4 240 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 Q6P435 159 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ZNF474Q6S9Z5 364 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 THAP6Q8TBB0 222 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 NEK7Q8TDX7 302 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 PIK3IP1Q96FE7 263 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 GSX2Q9BZM3 304 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 METTL8Q9H825 291 aaKnown RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 MBD2Q9UBB5 411 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 PURGQ9UJV8 347 aaKnown RBP15.72■□□□□ 0.11
HOXC11-201ENST00000243082 SLC25A15Q9Y619 301 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 DMXL2Q8TDJ6 3036 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 IGHV2OR16-5A0A0B4J2B6 119 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 OR2F2O95006 317 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 GLAP06280 429 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 SCTP09683 121 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 TIMP3P35625 211 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 RBMXP38159 391 aaKnown RBP15.71■□□□□ 0.11
HOXC11-201ENST00000243082 OR2F1Q13607 317 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 OR8G1Q15617 311 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 ZNF324BQ6AW86 544 aaPredicted RBP15.71■□□□□ 0.11
HOXC11-201ENST00000243082 OR8G5Q8NG78 346 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 RDH5Q92781 318 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 RNF126Q9BV68 326 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 C1orf123Q9NWV4 160 aa15.71■□□□□ 0.11
HOXC11-201ENST00000243082 CDIPTO14735 213 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 MLNRO43193 412 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 B3GALNT1O75752 331 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 HOXB5P09067 269 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TUBG1P23258 451 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 IL15RAQ13261 267 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 EIF2S3LQ2VIR3 472 aaKnown RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 UNQ6126/PRO20091Q6UXV3 157 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 C20orf204Q6ZNR8 217 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 ACOT7LQ6ZUV0 252 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 SPACA3Q8IXA5 215 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 FAM169BQ8N8A8 192 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 MRPL30Q8TCC3 161 aaKnown RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 NRIP2Q9BQI9 281 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TUBG2Q9NRH3 451 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TMEM100Q9NV29 134 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TINAGQ9UJW2 476 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 POLDIP2Q9Y2S7 368 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 AMDHD2Q9Y303 409 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 AUP1Q9Y679 476 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TRBV6-7A0A0A0MS04 114 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 LEUTXA8MZ59 168 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 H0YIZ8 118 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 PPYP01298 95 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 PGA5P0DJD9 388 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 RBM39Q14498 530 aaKnown RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 HERPUD1Q15011 391 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 ABCA11PQ4W5N1 156 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 Q8IYB0 196 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 SLC38A6Q8IZM9 456 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 POC1AQ8NBT0 407 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 FAM57AQ8TBR7 257 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 RTN4IP1Q8WWV3 396 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 C2orf50Q96LR7 162 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 CITED4Q96RK1 184 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 VRK1Q99986 396 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 RSRP1Q9BUV0 290 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 BCL2L14Q9BZR8 327 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 RIMS4Q9H426 269 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-201ENST00000243082 NAA60Q9H7X0 242 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 SLC2A9Q9NRM0 540 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 ATP23Q9Y6H3 246 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 APC2O95996 2303 aa15.7■□□□□ 0.1
HOXC11-201ENST00000243082 TRBV6-6A0A0A6YYG2 114 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 IGHV3-64DA0A0J9YX35 117 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 TRDCB7Z8K6 153 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 DEGS1O15121 323 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 KITLGP21583 273 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 FAM180AQ6UWF9 173 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 GALNT14Q96FL9 552 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 TP53TG5Q9Y2B4 290 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 BSNQ9UPA5 3926 aa15.69■□□□□ 0.1
HOXC11-201ENST00000243082 TMEM210A6NLX4 147 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 SLC34A2O95436 690 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 GRPP07492 148 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 CEACAM8P31997 349 aaPredicted RBP15.68■□□□□ 0.1
HOXC11-201ENST00000243082 HERV-K104P61576 105 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 TMEM187Q14656 261 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms