RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 RHBDD3Q9Y3P4 386 aa17.31■□□□□ 0.36
HOXC13-201ENST00000243056 AHSA1O95433 338 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 HSPB1P04792 205 aaKnown RBP17.3■□□□□ 0.36
HOXC13-201ENST00000243056 OR10J1P30954 320 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 GNB2P62879 340 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 VAMP2P63027 116 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 UNC119Q13432 240 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF66Q6ZN08 573 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 TP53RKQ96S44 253 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 TBX15Q96SF7 602 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 TMEM242Q9NWH2 141 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 TUBD1Q9UJT1 453 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 PPP5D1E7EU14 171 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 H7C1C5 153 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ARPC3O15145 178 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 MT-CO3P00414 261 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 PNPP00491 289 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 MMP9P14780 707 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ALOX5APP20292 161 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 KLF3P57682 345 aaPredicted RBP17.3■□□□□ 0.36
HOXC13-201ENST00000243056 LCN6P62502 163 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 PRSS8Q16651 343 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 TDRG1Q3Y452 100 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ALG10BQ5I7T1 473 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF506Q5JVG8 444 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ASCL5Q7RTU5 278 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 SGPP2Q8IWX5 399 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 LYG1Q8N1E2 194 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ZFP62Q8NB50 900 aaPredicted RBP17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF721Q8TF20 911 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ASB5Q8WWX0 329 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 ANGPTL4Q9BY76 406 aa17.3■□□□□ 0.36
HOXC13-201ENST00000243056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.3■□□□□ 0.36
HOXC13-201ENST00000243056 CACNA1CQ13936 2221 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 C17orf51A8MQB3 221 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF705FA8MVS1 300 aaPredicted RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 IGHEP01854 428 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF705DP0CH99 300 aaPredicted RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF705BP0CI00 300 aaPredicted RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 C1QL3Q5VWW1 255 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 SLC25A24Q6NUK1 477 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 MRGPRDQ8TDS7 321 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 NXF5Q9H1B4 397 aaKnown RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 JMJD7P0C870 316 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 OR3A2P47893 321 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 NUDT10Q8NFP7 164 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 OR13G1Q8NGZ3 307 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 SLC25A44Q96H78 314 aaPredicted RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 ACY3Q96HD9 319 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 GPR35Q9HC97 309 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF581Q9P0T4 197 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 RNF150Q9ULK6 438 aa17.29■□□□□ 0.36
HOXC13-201ENST00000243056 COL5A1P20908 1838 aaPredicted RBP17.29■□□□□ 0.36
HOXC13-201ENST00000243056 LOC105371242A0A075B767 164 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 FAM221AA4D161 298 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 CBY3A6NI87 242 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 A8MVM7 634 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 CIDEAO60543 219 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 OPN1MWP04001 364 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 OPN1MW2P0DN77 364 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 OPN1MW3P0DN78 364 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 PTGER4P35408 488 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 ASCL1P50553 236 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 EMP2P54851 167 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 SLC24A4Q8NFF2 622 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 PTX4Q96A99 478 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 FGGYQ96C11 551 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 SDSLQ96GA7 329 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 C20orf144Q9BQM9 153 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 ZNF700Q9H0M5 742 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 IGLV3-12A0A075B6K2 115 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 XRCC2O43543 280 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 GALNSP34059 522 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 NBL1P41271 181 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 SP5Q6BEB4 398 aaPredicted RBP17.28■□□□□ 0.36
HOXC13-201ENST00000243056 ANKRD37Q7Z713 158 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 PIP4P1Q86T03 277 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 SNIP1Q8TAD8 396 aaKnown RBP17.28■□□□□ 0.36
HOXC13-201ENST00000243056 FNDC9Q8TBE3 224 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 THRSPQ92748 146 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 MRPL24Q96A35 216 aaKnown RBP17.28■□□□□ 0.36
HOXC13-201ENST00000243056 ALKBH7Q9BT30 221 aaPredicted RBP17.28■□□□□ 0.36
HOXC13-201ENST00000243056 ELOVL3Q9HB03 270 aa17.28■□□□□ 0.36
HOXC13-201ENST00000243056 C9orf172C9J069 976 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 AQP7O14520 342 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 NKX2-2O95096 273 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 IGKV3-11P04433 115 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 CELA2AP08217 269 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 MFGE8Q08431 387 aaPredicted RBP17.27■□□□□ 0.36
HOXC13-201ENST00000243056 VAX1Q5SQQ9 334 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 OR4C3Q8NH37 302 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 TRIM2Q9C040 744 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 SDK2Q58EX2 2172 aa17.27■□□□□ 0.36
HOXC13-201ENST00000243056 GPR137BO60478 399 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 AGR2O95994 175 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 PPBPP02775 128 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 FAM189A2Q15884 450 aa17.27■□□□□ 0.35
HOXC13-201ENST00000243056 C1orf100Q5SVJ3 147 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms