RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TDGF1P13385 188 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ICAM4Q14773 271 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 UNQ6494/PRO21346Q6UXR6 183 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 VASH2Q86V25 355 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TXNIPQ9H3M7 391 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 CHD5Q8TDI0 1954 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM176BQ3YBM2 270 aaPredicted RBP11.36□□□□□ -0.59
VAMP4-201ENST00000236192 MKXQ8IYA7 352 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 OR5A2Q8NGI9 324 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 WBP1Q96G27 269 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 METTL7AQ9H8H3 244 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
VAMP4-201ENST00000236192 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TMED7-TICAM2A0A0A6YYA0 188 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 H0YIZ8 118 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 H3BNC9 293 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 SLC35E2P0CK97 266 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 FMODQ06828 376 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 HYAL1Q12794 435 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 RAET1LQ5VY80 246 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF683Q8IZ20 524 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 KISS1RQ969F8 398 aaPredicted RBP11.36□□□□□ -0.59
VAMP4-201ENST00000236192 LOXL4Q96JB6 756 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 HINT2Q9BX68 163 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 NHSL1Q5SYE7 1610 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 BLACEA4D250 179 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 FSTP19883 344 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ATOH7Q8N100 152 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM252Q8N6L7 170 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ABI3Q9P2A4 366 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ANXA10Q9UJ72 324 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
VAMP4-201ENST00000236192 F11P03951 625 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 WDFY1Q8IWB7 410 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF48Q96MX3 618 aaPredicted RBP11.35□□□□□ -0.59
VAMP4-201ENST00000236192 HRASLS2Q9NWW9 162 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 NKX2-6A6NCS4 301 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 E9PQ18 207 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 OR3A4PP47883 348 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 MFAP5Q13361 173 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 TSPO2Q5TGU0 170 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 PNKDQ8N490 385 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 ADOQ96SZ5 270 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 WNT10AQ9GZT5 417 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 LIN7CQ9NUP9 197 aaKnown RBP11.35□□□□□ -0.59
VAMP4-201ENST00000236192 HCRTR1O43613 425 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 VENTXO95231 258 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 NUDT3O95989 172 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 TBL2Q9Y4P3 447 aaKnown RBP11.35□□□□□ -0.59
VAMP4-201ENST00000236192 NTHL1P78549 312 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 NHLRC2Q8NBF2 726 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 HS3ST2Q9Y278 367 aa11.35□□□□□ -0.59
VAMP4-201ENST00000236192 DUSP11O75319 330 aaKnown RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 SCGB2A1O75556 95 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 ERASQ7Z444 233 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 KMT5CQ86Y97 462 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 PRR22Q8IZ63 422 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 PIGCQ92535 297 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 RBM24Q9BX46 236 aaKnown RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 EPHA8P29322 1005 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 KIR2DS3Q14952 304 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 LY6G5CQ5SRR4 150 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 MRGPRX3Q96LB0 322 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 OTOL1A6NHN0 477 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 KLKB1P03952 638 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 MPLP40238 635 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 LYRM7Q5U5X0 104 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 RNF133Q8WVZ7 376 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 FLRT3Q9NZU0 649 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 H3BML4 177 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 MPPED1O15442 326 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 VIPR2P41587 438 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 UBE2G1P62253 170 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 RPS11P62280 158 aaKnown RBP eCLIP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 KIAA0895LQ68EN5 471 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM147Q9BVK8 224 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 KIR3DX1Q9H7L2 352 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 LYRM4Q9HD34 91 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 SPHK2Q9NRA0 654 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 JKAMPQ9P055 326 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 APOBEC3BQ9UH17 382 aaKnown RBP11.34□□□□□ -0.59
VAMP4-201ENST00000236192 Q9Y3F1 56 aa11.34□□□□□ -0.59
VAMP4-201ENST00000236192 CRYM-AS1A6NIL9 109 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms