RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HIKESHIQ53FT3 197 aa17.78■□□□□ 0.44
SNX3-201ENST00000230085 IGFL2Q6UWQ7 119 aa17.78■□□□□ 0.44
SNX3-201ENST00000230085 SPSB1Q96BD6 273 aa17.78■□□□□ 0.44
SNX3-201ENST00000230085 LSM5Q9Y4Y9 91 aaKnown RBP17.78■□□□□ 0.44
SNX3-201ENST00000230085 TRAV20A0A0B4J274 112 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 M0R036 132 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 OR5H8P0DN80 308 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 SSR4P51571 173 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 UBE2V2Q15819 145 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 PCSK4Q6UW60 755 aa17.77■□□□□ 0.44
SNX3-201ENST00000230085 MARS2Q96GW9 593 aaKnown RBP17.77■□□□□ 0.44
SNX3-201ENST00000230085 AQP7P3A6NL99 342 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ST8SIA3O43173 380 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 PIGPP57054 158 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 CD81P60033 236 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 RPS23P62266 143 aaKnown RBP17.76■□□□□ 0.43
SNX3-201ENST00000230085 KRBOX4Q5JUW0 171 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 LGI3Q8N145 548 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 GJC3Q8NFK1 279 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 MSI2Q96DH6 328 aaKnown RBP17.76■□□□□ 0.43
SNX3-201ENST00000230085 MUCL1Q96DR8 90 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 PGAM5Q96HS1 289 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 EIF5A2Q9GZV4 153 aaKnown RBP17.76■□□□□ 0.43
SNX3-201ENST00000230085 TREM2Q9NZC2 230 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ABI3Q9P2A4 366 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 MSTNO14793 375 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 NME2P1O60361 137 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 CDS2O95674 445 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ZNF728P0DKX0 622 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ANOS1P23352 680 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 PTGDSP41222 190 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 CDX1P47902 265 aaPredicted RBP17.76■□□□□ 0.43
SNX3-201ENST00000230085 SRPXP78539 464 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ARG2P78540 354 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ZNF616Q08AN1 781 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 LY6DQ14210 128 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 FOXRED2Q8IWF2 684 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 FAM24BQ8N5W8 94 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 SLC22A8Q8TCC7 542 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 OPA3Q9H6K4 179 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 ZDHHC8Q9ULC8 765 aa17.76■□□□□ 0.43
SNX3-201ENST00000230085 hCG_1809904A0A1W2PP81 198 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 A0A1W2PR64 198 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 A0A1W2PRV1 198 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 QDPRP09417 244 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 CBR1P16152 277 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 AKR1C3P42330 323 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 CYB561P49447 251 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 RAB2AP61019 212 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 OR8B8Q15620 311 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 SPINK14Q6IE38 97 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 IGFL3Q6UXB1 125 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 ZNF565Q8N9K5 539 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 OR4D5Q8NGN0 318 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 ISOC2Q96AB3 205 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 SIGLEC12Q96PQ1 595 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 TOLLIPQ9H0E2 274 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 SIRT7Q9NRC8 400 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 ZNF701Q9NV72 531 aaPredicted RBP17.75■□□□□ 0.43
SNX3-201ENST00000230085 PLEKHJ1Q9NW61 149 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 VDAC3Q9Y277 283 aa17.75■□□□□ 0.43
SNX3-201ENST00000230085 ATRXP46100 2492 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 NQO2P16083 231 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 SERPINA2P20848 420 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 MSR1P21757 451 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 CDAP32320 146 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 ZNF266Q14584 549 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 IGSF11Q5DX21 431 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 SOHLH1Q5JUK2 328 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 OR13D1Q8NGV5 346 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 RTN4IP1Q8WWV3 396 aaPredicted RBP17.74■□□□□ 0.43
SNX3-201ENST00000230085 SMIM3Q9BZL3 60 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 LRFN1Q9P244 771 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 KIAA1456Q9P272 454 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 EML6Q6ZMW3 1958 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 OR5H15A6NDH6 313 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 E9PLN8 166 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 H3BML4 177 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 FCGR2AP12318 317 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 FAM185AQ8N0U4 392 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 ZADH2Q8N4Q0 377 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 WDSUB1Q8N9V3 476 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 OR10G4Q8NGN3 311 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 MAFIPQ8WZ33 124 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 TMEM54Q969K7 222 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 MOB3AQ96BX8 217 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 BSCL2Q96G97 398 aaPredicted RBP17.74■□□□□ 0.43
SNX3-201ENST00000230085 BOD1Q96IK1 185 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 CYYR1Q96J86 154 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 NELFAQ9H3P2 528 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 LIME1Q9H400 295 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 IL36GQ9NZH8 169 aa17.74■□□□□ 0.43
SNX3-201ENST00000230085 RPL36A-HNRNPH2H7BZ11 118 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 PITX3O75364 302 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 NEURL1O76050 574 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 OR2C1O95371 312 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 OR5AC1P0C628 307 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 MMP9P14780 707 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 OR1C1Q15619 314 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 ADAM5Q6NVV9 412 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms