RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 F5H5P2 479 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 IGHV3-13P01766 116 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 ECI1P42126 302 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 MSMPQ1L6U9 139 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 PEG10Q86TG7 708 aaKnown RBP12.63□□□□□ -0.39
CCDC47-201ENST00000225726 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
CCDC47-201ENST00000225726 DLL4Q9NR61 685 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 GPR132Q9UNW8 380 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 IGF2RP11717 2491 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 DUSP1P28562 367 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 NPY4RP50391 375 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 AADACL3Q5VUY0 350 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 Q6ZS49 121 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 NLRC3Q7RTR2 1065 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 GTF3AQ92664 365 aaKnown RBP12.63□□□□□ -0.39
CCDC47-201ENST00000225726 MSL2Q9HCI7 577 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 ZBTB25P24278 435 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 KLF3P57682 345 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 UBE2MP61081 183 aaKnown RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 DHRS2Q13268 280 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 SLC22A25Q6T423 547 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 LYG2Q86SG7 212 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 C12orf45Q8N5I9 185 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 RANBP3Q9H6Z4 567 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 CA10Q9NS85 328 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 NXPH2O95156 264 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 NAPSAO96009 420 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 Q6P435 159 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM108Q6UXF1 575 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM171Q8WVE6 324 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 HES4Q9HCC6 221 aa12.62□□□□□ -0.39
CCDC47-201ENST00000225726 DEGS1O15121 323 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 GIPP09681 153 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 Q6ZPA2 131 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 NEK7Q8TDX7 302 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 DUSP13Q9UII6 198 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 IGLV3-9A0A075B6K5 115 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 TRAV24A0A0B4J272 114 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 HLA-AP01891 365 aaKnown RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 PPP3CBP16298 524 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 PTAFRP25105 342 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 CD200P41217 278 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 PPP1R1AQ13522 171 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 FAM209BQ5JX69 171 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 FIP1L1Q6UN15 594 aaKnown RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 ZNF2Q9BSG1 426 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 DPCDQ9BVM2 203 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-201ENST00000225726 PRR14LQ5THK1 2151 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 PIEZO2Q9H5I5 2752 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 OR5H14A6NHG9 310 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 ZNF146Q15072 292 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 WFDC8Q8IUA0 241 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 GRPEL2Q8TAA5 225 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 Q9N2K0 584 aa12.61□□□□□ -0.39
CCDC47-201ENST00000225726 C9orf170A2RU37 121 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 OR2A4O95047 310 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 THBDP07204 575 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 MPPED2Q15777 294 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 PRAMEF6Q5VXH4 476 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
CCDC47-201ENST00000225726 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 HEATR1Q9H583 2144 aaKnown RBP12.6□□□□□ -0.39
CCDC47-201ENST00000225726 C5orf66Q9H5L9 145 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 TRBV6-6A0A0A6YYG2 114 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 IGHV3-64DA0A0J9YX35 117 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 GOSR2O14653 212 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 SLC34A2O95436 690 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 ZNF44P15621 663 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 AKR1C4P17516 323 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 DHODHQ02127 395 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 VHLLQ6RSH7 139 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 UXS1Q8NBZ7 420 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 PIPOXQ9P0Z9 390 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 A6NLC8 198 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 HSPB6O14558 160 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 HS3ST1O14792 307 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 SH2D1BO14796 132 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 CD34P28906 385 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 ASCL1P50553 236 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 RAP2BP61225 183 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
CCDC47-201ENST00000225726 SYT3Q9BQG1 590 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms