RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 MCEMP1Q8IX19 187 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 APOBEC3DQ96AK3 386 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-201ENST00000221922 KIRREL1Q96J84 757 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 SMIM3Q9BZL3 60 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 ZNF286AQ9HBT8 521 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 FAM212BQ9NTI7 297 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-201ENST00000221922 MEX3AA1L020 520 aaKnown RBP19.09■□□□□ 0.65
CCDC9-201ENST00000221922 SCGB1D2O95969 90 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 OR8U9P0C7N5 309 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 UCP3P55916 312 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 GPR157Q5UAW9 335 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 LIAT1Q6ZQX7 453 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 ZNF611Q8N823 705 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 NAXEQ8NCW5 288 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 OR8U1Q8NH10 309 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 GLYATL2Q8WU03 294 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 SLC2A9Q9NRM0 540 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 LHX6Q9UPM6 363 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 STARD10Q9Y365 291 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 AGPAT2O15120 278 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 HLA-HP01893 362 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 ID4P47928 161 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 UCP2P55851 309 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 MRPL21Q7Z2W9 205 aaKnown RBP19.08■□□□□ 0.64
CCDC9-201ENST00000221922 LYZL2Q7Z4W2 148 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-201ENST00000221922 OR56B2PQ8NGI1 322 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 RXFP4Q8TDU9 374 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 DYRK2Q92630 601 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 MSI2Q96DH6 328 aaKnown RBP19.08■□□□□ 0.64
CCDC9-201ENST00000221922 PAPOLGQ9BWT3 736 aaKnown RBP19.08■□□□□ 0.64
CCDC9-201ENST00000221922 DNAJC13O75165 2243 aa19.08■□□□□ 0.64
CCDC9-201ENST00000221922 C5orf49A4QMS7 147 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A10PA6NDY2 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A18PA6NE21 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A16PA6NEW6 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A20PA6NIJ5 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A8PA6NJQ4 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A7PA6NKC0 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A22PA8MWA6 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A12PA8MX19 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A5PA8MXJ8 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A23PA8MXZ1 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF205O95201 554 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A15PP0C7V4 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 SEC11BP0C7V7 166 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A13PP0C7W8 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A14PP0C7W9 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FAM90A24PP0C7X0 464 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 FUT3P21217 361 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 CCNOP22674 350 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 SWI5Q1ZZU3 235 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 AVPI1Q5T686 147 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 TMEM211Q6ICI0 200 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 SLC22A25Q6T423 547 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 COMMD1Q8N668 190 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 Q8NFD4 153 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 MOB3AQ96BX8 217 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 OPA3Q9H6K4 179 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 BIN3Q9NQY0 253 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 TNRC6AQ8NDV7 1962 aaKnown RBP19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF407Q9C0G0 2248 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF318Q5VUA4 2279 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 PQLC2LA1A4F0 135 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 GPR137BO60478 399 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 CRYBA1P05813 215 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 DANCRP0C864 163 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 PAX6P26367 422 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ARG2P78540 354 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 PEA15Q15121 130 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ZNF766Q5HY98 468 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 SLC25A26Q70HW3 274 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 CALHM1Q8IU99 346 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 SAXO1Q8IYX7 474 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 TMEM178AQ8NBL3 297 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 BSCL2Q96G97 398 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-201ENST00000221922 GINS3Q9BRX5 216 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 CACFD1Q9UGQ2 172 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 LIPGQ9Y5X9 500 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 OTOGLQ3ZCN5 2332 aa19.07■□□□□ 0.64
CCDC9-201ENST00000221922 ARHGAP21Q5T5U3 1957 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 SPAARA0A1B0GVQ0 90 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 FXYD4P59646 89 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 PLP2Q04941 152 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 SHEQ5VZ18 495 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 WFDC1Q9HC57 220 aa19.06■□□□□ 0.64
CCDC9-201ENST00000221922 BORCS7-ASMTA0A0B4J1R7 106 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 COLCA2A8K830 154 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 PRSS44E7EML9 344 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 DUSP1P28562 367 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 P2RY1P47900 373 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 PRDX4Q13162 271 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 IL13RA2Q14627 380 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 HMGN3Q15651 99 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 PHLDA2Q53GA4 152 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 BRICD5Q6PL45 260 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 DPPA2Q7Z7J5 298 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 LGI3Q8N145 548 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 SYT3Q9BQG1 590 aa19.05■□□□□ 0.64
CCDC9-201ENST00000221922 SCRT1Q9BWW7 348 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms