RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 WDFY1Q8IWB7 410 aa9.31□□□□□ -0.92
VPS18-201ENST00000220509 GFI1Q99684 422 aa9.31□□□□□ -0.92
VPS18-201ENST00000220509 KCNJ16Q9NPI9 418 aa9.31□□□□□ -0.92
VPS18-201ENST00000220509 RAB22AQ9UL26 194 aa9.31□□□□□ -0.92
VPS18-201ENST00000220509 TNFSF18Q9UNG2 199 aa9.31□□□□□ -0.92
VPS18-201ENST00000220509 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 TNFSF11O14788 317 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 GDF9O60383 454 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 DFFBO76075 338 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 WNT11O96014 354 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ERVFRD-1P60508 538 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 UBE2NP61088 152 aaKnown RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 PJVKQ0ZLH3 352 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 PRR27Q6MZM9 219 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 HPSE2Q8WWQ2 592 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 SLC25A21Q9BQT8 299 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 LRFN1Q9P244 771 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 PIGLQ9Y2B2 252 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 K7EPK0 472 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 PRSS12P56730 875 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ZNF121P58317 390 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 SELENOTP62341 195 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 C6orf15Q6UXA7 325 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ZNF501Q96CX3 271 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 REEP6Q96HR9 211 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 TAF9BQ9HBM6 251 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 R4GN57 208 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ZNF705FA8MVS1 300 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 CD5P06127 495 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 NBEAP1P0C6P0 100 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ZNF705DP0CH99 300 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 ZNF705BP0CI00 300 aaPredicted RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 GNB3P16520 340 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 VAMP3Q15836 100 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 CNEP1R1Q8N9A8 125 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
VPS18-201ENST00000220509 OR9K2Q8NGE7 335 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 OR5AP2Q8NGF4 316 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 OR51A2Q8NGJ7 313 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 GUCD1Q96NT3 240 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 OXGR1Q96P68 337 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 RASL10BQ96S79 203 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 RAB33BQ9H082 229 aa9.3□□□□□ -0.92
VPS18-201ENST00000220509 DMDP11532 3685 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 A0A1W2PR77 199 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 SLC17A2O00624 439 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 ACKR3P25106 362 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 OR2T2Q6IF00 324 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 IP6K3Q96PC2 410 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 NRIP2Q9BQI9 281 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 ASCL1P50553 236 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 AWAT1Q58HT5 328 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 ANKRD16Q6P6B7 361 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 C1orf210Q8IVY1 113 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 OR13D1Q8NGV5 346 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 CPT1CQ8TCG5 803 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 RNF128Q8TEB7 428 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 TECTBQ96PL2 329 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 UBE2J1Q9Y385 318 aaPredicted RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 TBL2Q9Y4P3 447 aaKnown RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 NUP210Q8TEM1 1887 aaPredicted RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 ROS1P08922 2347 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 PCDH15Q96QU1 1955 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 A0A096LPE4 126 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 IGHV5-10-1A0A0J9YXX1 117 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 M0R135 149 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 B4GALT1P15291 398 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 IL11P20809 199 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 RPS4Y1P22090 263 aaKnown RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 CD96P40200 585 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 EFNA3P52797 238 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 WDR74Q6RFH5 385 aaPredicted RBP9.29□□□□□ -0.92
VPS18-201ENST00000220509 ZNF611Q8N823 705 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 ZNF610Q8N9Z0 462 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 PLPP5Q8NEB5 264 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 PPP1R35Q8TAP8 253 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 ZNF799Q96GE5 643 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 KIRREL1Q96J84 757 aa9.29□□□□□ -0.92
VPS18-201ENST00000220509 DIDO1Q9BTC0 2240 aaKnown RBP9.28□□□□□ -0.92
VPS18-201ENST00000220509 PLXNA2O75051 1894 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 IGHV3-64DA0A0J9YX35 117 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 RNF222A6NCQ9 220 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 IFITM10A6NMD0 228 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 PRR32B1ATL7 298 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 ABHD16AO95870 558 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 UCP1P25874 307 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 SUMO3P55854 103 aaPredicted RBP9.28□□□□□ -0.92
VPS18-201ENST00000220509 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 UBE2KP61086 200 aa9.28□□□□□ -0.92
VPS18-201ENST00000220509 LY6G6FQ5SQ64 297 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms