RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TEX13DA0A0J9YY54 714 aaPredicted RBP25.27■■□□□ 1.64
PABPN1-201ENST00000216727 MPV17P39210 176 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 ERVK11-1P61568 191 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 ACOT7LQ6ZUV0 252 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 SLC38A6Q8IZM9 456 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 BCL2L14Q9BZR8 327 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 METTL8Q9H825 291 aaKnown RBP25.27■■□□□ 1.64
PABPN1-201ENST00000216727 TRBV6-7A0A0A0MS04 114 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 TRBV6-6A0A0A6YYG2 114 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 TMEM210A6NLX4 147 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 ZNF205O95201 554 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 AP2S1P53680 142 aaPredicted RBP25.27■■□□□ 1.64
PABPN1-201ENST00000216727 RAB14P61106 215 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 FOXC1Q12948 553 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 RBM39Q14498 530 aaKnown RBP25.27■■□□□ 1.64
PABPN1-201ENST00000216727 C1orf174Q8IYL3 243 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 NEK7Q8TDX7 302 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 SLX1AQ9BQ83 275 aa25.27■■□□□ 1.64
PABPN1-201ENST00000216727 TRAV24A0A0B4J272 114 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 KIR2DS1A0A191URI9 304 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 SPINK2P20155 84 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 KIR2DS4P43632 304 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 KIR2DS1Q14954 304 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 ABCA11PQ4W5N1 156 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 GALNT14Q96FL9 552 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 C2orf50Q96LR7 162 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 MBD2Q9UBB5 411 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 AUP1Q9Y679 476 aa25.26■■□□□ 1.63
PABPN1-201ENST00000216727 RNF222A6NCQ9 220 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 FXYD4P59646 89 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 ZNF154Q13106 437 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 IGSF11Q5DX21 431 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 OR8G5Q8NG78 346 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 PURGQ9UJV8 347 aaKnown RBP25.25■■□□□ 1.63
PABPN1-201ENST00000216727 KCNIP3Q9Y2W7 256 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 SLC25A15Q9Y619 301 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 ATP23Q9Y6H3 246 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 SHANK1Q9Y566 2161 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 OR8G1Q15617 311 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 IGFBP7Q16270 282 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 VRK1Q99986 396 aaPredicted RBP25.25■■□□□ 1.63
PABPN1-201ENST00000216727 NRIP2Q9BQI9 281 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 RSRP1Q9BUV0 290 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 NAA60Q9H7X0 242 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 TMEM100Q9NV29 134 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 WASF3Q9UPY6 502 aa25.25■■□□□ 1.63
PABPN1-201ENST00000216727 IGHV1-18A0A0C4DH31 117 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 PPYP01298 95 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 ACAA1P09110 424 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-201ENST00000216727 PGA5P0DJD9 388 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 KITLGP21583 273 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 AADACP22760 399 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 HERV-K104P61576 105 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 Q6P435 159 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 FAM180AQ6UWF9 173 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 RTN4IP1Q8WWV3 396 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-201ENST00000216727 OR10C1Q96KK4 312 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 LUZP4Q9P127 313 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 IGHV2OR16-5A0A0B4J2B6 119 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 MPTX1A8MV57 137 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 TRDCB7Z8K6 153 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 HSPB6O14558 160 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 SLC34A2O95436 690 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 HOXD4P09016 255 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-201ENST00000216727 IL15RAQ13261 267 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 FAM57AQ8TBR7 257 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 SLC2A9Q9NRM0 540 aa25.24■■□□□ 1.63
PABPN1-201ENST00000216727 CTXN2P0C2S0 81 aa25.23■■□□□ 1.63
PABPN1-201ENST00000216727 ZNF324BQ6AW86 544 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-201ENST00000216727 POC1AQ8NBT0 407 aa25.23■■□□□ 1.63
PABPN1-201ENST00000216727 INO80EQ8NBZ0 244 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-201ENST00000216727 MRPL30Q8TCC3 161 aaKnown RBP25.23■■□□□ 1.63
PABPN1-201ENST00000216727 SCARB1Q8WTV0 552 aa25.23■■□□□ 1.63
PABPN1-201ENST00000216727 ABHD17AQ96GS6 310 aa25.23■■□□□ 1.63
PABPN1-201ENST00000216727 SYT3Q9BQG1 590 aa25.23■■□□□ 1.63
PABPN1-201ENST00000216727 LAMA5O15230 3695 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 POM121CA8CG34 1229 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 HS3ST1O14792 307 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 DEGS1O15121 323 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 TK1P04183 234 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 ATXN7L3Q14CW9 347 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-201ENST00000216727 RPRMLQ8N4K4 120 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 RNF126Q9BV68 326 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 KIF25Q9UIL4 384 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-201ENST00000216727 LEUTXA8MZ59 168 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 CDIPTO14735 213 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 HOXB5P09067 269 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 LYL1P12980 280 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 ZNF880Q6PDB4 577 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 ZNF474Q6S9Z5 364 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-201ENST00000216727 RDH5Q92781 318 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 SCNM1Q9BWG6 230 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 SFXN3Q9BWM7 321 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 TREM2Q9NZC2 230 aa25.22■■□□□ 1.63
PABPN1-201ENST00000216727 KANTRA0A1W2PQU2 76 aa25.21■■□□□ 1.63
PABPN1-201ENST00000216727 H0YL77 283 aa25.21■■□□□ 1.63
PABPN1-201ENST00000216727 BCL2L11O43521 198 aa25.21■■□□□ 1.63
PABPN1-201ENST00000216727 SCTP09683 121 aa25.21■■□□□ 1.63
PABPN1-201ENST00000216727 CEACAM8P31997 349 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms