RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CSNK1DP48730 415 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 EMDP50402 254 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC25A30Q5SVS4 291 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 SIGIRRQ6IA17 410 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ZC3H3Q8IXZ2 948 aaKnown RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 NOXO1Q8NFA2 376 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 HAND1O96004 215 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 CHRNA10Q9GZZ6 450 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 COL3A1P02461 1466 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 DCCP43146 1447 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 K7ESM1 405 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 ORAI1Q96D31 301 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 COL14A1Q05707 1796 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 WNT5AP41221 380 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 DIO1P49895 249 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 ZDHHC22Q8N966 263 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 OR1F12Q8NHA8 337 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 CCL26Q9Y258 94 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 LRP12Q9Y561 859 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM90A27PA6NNH2 459 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 C9orf172C9J069 976 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 METRNLQ641Q3 311 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 MRM1Q6IN84 353 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 CGB2Q6NT52 195 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 TMEM136Q6ZRR5 245 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 SS18L1O75177 396 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 CDK5R1Q15078 307 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 ZNF418Q8TF45 676 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 PP6455Q8WZ26 134 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 BTG2P78543 158 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 UBTD2Q8WUN7 234 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 POMT2Q9UKY4 750 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 TRAV1-2A0A0B4J238 106 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 PDE6DO43924 150 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 ZNF735P0CB33 412 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 NPPBP16860 134 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 SSMEM1Q8WWF3 244 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
SPTLC2-201ENST00000216484 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 CXCL13O43927 109 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 MDH2P40926 338 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 PNLIPRP2P54317 469 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 DEFB103AP81534 67 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 OR13C6PQ8NH95 151 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 FOXQ1Q9C009 403 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 HLA-DRB3P79483 266 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 DPH3P1Q9H4G8 78 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 ID1P41134 155 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 KISS1Q15726 138 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 ERASQ7Z444 233 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 OR13H1Q8NG92 308 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 A0A1W2PR80 420 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 WNT1P04628 370 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 AQP6Q13520 282 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 HDGFL3Q9Y3E1 203 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 F11RQ9Y624 299 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 CDCA4Q9BXL8 241 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 MRC1P22897 1456 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 TMEM272A0A1B0GTI8 110 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 MRGPRX4Q96LA9 322 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 RBFOX2O43251 390 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 RELQ04864 619 aaPredicted RBP13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 IL24Q13007 206 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 DHRS2Q13268 280 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM222BQ8WU58 562 aa13.04□□□□□ -0.32
SPTLC2-201ENST00000216484 ZAR1LA6NP61 321 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 H3BMH7 237 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 PTCRAQ6ISU1 281 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 ARRDC1Q8N5I2 433 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 A0A1W2PR48 441 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 GPR3P46089 330 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC35B1P78383 322 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 TNFAIP6P98066 277 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 Q8WTZ3 238 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 SIGLEC11Q96RL6 698 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC26A1Q9H2B4 701 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 BRS3P32247 399 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 JOSD1Q15040 202 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 RTN4RQ9BZR6 473 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM53CQ9NYF3 392 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 OR2W1Q9Y3N9 320 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 CGB1A6NKQ9 187 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 KLK10O43240 276 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 RECKO95980 971 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 C10orf113Q5VZT2 155 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms