RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 FAM3AP98173 230 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 ZNF92Q03936 586 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 MYBPHQ13203 477 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 COL19A1Q14993 1142 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 PHYHD1Q5SRE7 291 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 ACTR3CQ9C0K3 210 aaPredicted RBP10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 WDR13Q9H1Z4 485 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 TRAPPC1Q9Y5R8 145 aa10.16□□□□□ -0.78
DNMT3B-201ENST00000201963 CLEC18AA5D8T8 446 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 APLNRP35414 380 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 GABRA4P48169 554 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 P2RY4P51582 365 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 VAMP3Q15836 100 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 ACOT6Q3I5F7 207 aaPredicted RBP10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 CYB5R2Q6BCY4 276 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 CLEC18CQ8NCF0 446 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 SLC25A43Q8WUT9 341 aaPredicted RBP10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 MSL2Q9HCI7 577 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 A0A1W2PR80 420 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 H0YIG0 161 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 DHHO43323 396 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 DYNLT3P51808 116 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 EWSR1Q01844 656 aaKnown RBP eCLIP10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 AQP10Q96PS8 301 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 PITPNC1Q9UKF7 332 aa10.15□□□□□ -0.78
DNMT3B-201ENST00000201963 SOX15O60248 233 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 CTXN2P0C2S0 81 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 MMP9P14780 707 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 BMP5P22003 454 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 GAMTQ14353 236 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 BSXQ3C1V8 233 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 OR10P1Q8NGE3 313 aa10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 INTS1Q8N201 2190 aaKnown RBP10.15□□□□□ -0.79
DNMT3B-201ENST00000201963 C3orf85A0A1B0GTC6 90 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 LILRA5A6NI73 299 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 GAPDHP04406 335 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 PGA3P0DJD8 388 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 MMP16P51512 607 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 PPP1CBP62140 327 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 RUNX1Q01196 453 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 NHLH1Q02575 133 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 PNRC1Q12796 327 aaPredicted RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 LY6G6FQ5SQ64 297 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 ZNF808Q8N4W9 903 aaPredicted RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 OXGR1Q96P68 337 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 TAAR9Q96RI9 348 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 ESRP2Q9H6T0 727 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 CDH20Q9HBT6 801 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 SLC2A9Q9NRM0 540 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 NYNRINQ9P2P1 1898 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 ALG1L2C9J202 215 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 H0Y8G0 127 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 ERGP11308 486 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 COX5AP20674 150 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 FUT3P21217 361 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 SUMO1P63165 101 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 HIST1H3AP68431 136 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 RALGAPA1Q6GYQ0 2036 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 BTNL8Q6UX41 500 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 NOXO1Q8NFA2 376 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 MCHR2Q969V1 340 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 TBX6O95947 436 aaPredicted RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 UBE2NP61088 152 aaKnown RBP10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 EXTL1Q92935 676 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 SLC25A22Q9H936 323 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
DNMT3B-201ENST00000201963 A0A1W2PR77 199 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ANKUB1A6NFN9 424 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 F6UZH7 168 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 HKR1P10072 659 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 GDF1P27539 372 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ZNF154Q13106 437 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ZNF343Q6P1L6 599 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 C5orf66Q9H5L9 145 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 B4GALT7Q9UBV7 327 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 MCTS1Q9ULC4 181 aaKnown RBP10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 GREB1Q4ZG55 1949 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ZNF729A6NN14 1252 aaPredicted RBP10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 CHST1O43916 411 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 PRF1P14222 555 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 CLN3Q13286 438 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 LHFPL2Q6ZUX7 228 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 PRSS33Q8NF86 280 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 PTX4Q96A99 478 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ADGRG7Q96K78 797 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 GNG12Q9UBI6 72 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 ZNF737O75373 536 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 DHRS3O75911 302 aa10.13□□□□□ -0.79
DNMT3B-201ENST00000201963 NXPH2O95156 264 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms