RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 NUDT10Q8NFP7 164 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 OR8B4Q96RC9 309 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 LANCL2Q9NS86 450 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SERGEFQ9UGK8 458 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ANKRD20A5PA0PJZ0 165 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 IGLV3-27P01718 113 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PCSK6P29122 969 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 MC5RP33032 325 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TRAV20A0A0B4J274 112 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 A0A0B4J2E0 115 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1B0GX12 115 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 C5orf52A6NGY3 159 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 NPIPB13A6NJU9 1138 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 FAM171A2A8MVW0 826 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 NPIPB4C9JG80 1138 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PRKRAO75569 313 aaKnown RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 MPLP40238 635 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TM4SF4P48230 202 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 LIAT1Q6ZQX7 453 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 WDR89Q96FK6 387 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 CLEC1BQ9P126 229 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 CTXND1A0A1B0GTU2 59 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 H3BMH7 237 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 BSXQ3C1V8 233 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 CLLU1OSQ5K130 101 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 CTSVO60911 334 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SMAD4Q13485 552 aaKnown RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF468Q5VIY5 522 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ICAM5Q9UMF0 924 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 H7C1H1 209 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 HLA-DRB3P79483 266 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 KISS1Q15726 138 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 PYCR3Q53H96 274 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 DEFB132Q7Z7B7 95 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ZBTB44Q8NCP5 570 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ATXN7L1Q9ULK2 861 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 KIAA1549LQ6ZVL6 1849 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 G3V3Y1 287 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 SRFP11831 508 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 FGF5P12034 268 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CCSMST1Q4G0I0 132 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 FBXO27Q8NI29 283 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 RPEQ96AT9 228 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TPSD1Q9BZJ3 242 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 SLIRPQ9GZT3 109 aaKnown RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 AUNIPQ9H7T9 357 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TNFSF18Q9UNG2 199 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF835Q9Y2P0 537 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 A0A0U1RQV5 110 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 M0R3E3 92 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 UCP3P55916 312 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 KLF3P57682 345 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 OR2V1Q8NHB1 315 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 VN1R17PQ8TDU5 208 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1W2PQD3 144 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 OR1D5P58170 312 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 SSPNQ14714 243 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CCL14Q16627 93 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 PLPPR5Q32ZL2 321 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 C17orf99Q6UX52 265 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TTC9BQ8N6N2 239 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TRAV30A0A087WSZ9 112 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CTAG2O75638 210 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TSPOP30536 169 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 OPRM1P35372 400 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 UBE2V2Q15819 145 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CDKN3Q16667 212 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TEX30Q5JUR7 227 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM215Q68D42 235 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 OR5M11Q96RB7 305 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 HSPB6O14558 160 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 STATHP02808 62 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ASIPP42127 132 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 LBX1P52954 281 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF816Q0VGE8 651 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 RTN4RL1Q86UN2 441 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 GPR78Q96P69 363 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 PPP1R3CQ9UQK1 317 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 COA3Q9Y2R0 106 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 C3orf85A0A1B0GTC6 90 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CHST1O43916 411 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CD3DP04234 171 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 COL8A1P27658 744 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 NUBP1P53384 320 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 GNB1P62873 340 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ZXDAP98168 799 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ZXDBP98169 803 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 SPEM1Q8N4L4 309 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CELF2-AS1Q8N7Q2 184 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 Q8WTZ3 238 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 A0A0A6YYD5 115 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 MASP2O00187 686 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 SOCS6O14544 535 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 ACRP10323 421 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-201ENST00000011700 HTR6P50406 440 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 CTSCP53634 463 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 EDDM3AQ14507 147 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms