RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm6803J3QPI8 144 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Atf1P81269 269 aaKnown RBP13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 PcnpQ6P8I4 178 aaKnown RBP13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Exosc6Q8BTW3 273 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Pars2Q8CFI5 475 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr1038Q8VGS1 319 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Slc33a1Q99J27 550 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Mcts1Q9DB27 181 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Ccr9Q9WUT7 369 aa13.85□□□□□ -0.19
Trim39-203ENSMUST00000113706 Dhrs3O88876 302 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Lin54Q571G4 749 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 GldnQ8BMF8 549 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 NrrosQ8BMT4 693 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 DpcdQ8BPA8 203 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Chrdl2Q8VEA6 426 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Cdk20Q9JHU3 346 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Plp2Q9R1Q7 152 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Sfrp5Q9WU66 314 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Bcl3Q9Z2F6 448 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Apc2Q9Z1K7 2274 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Trbv23A0A0A6YWQ1 115 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm8225D3Z536 292 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Tesk1O70146 627 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gng8P63078 70 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 St3gal2Q11204 350 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Mpzl1Q3TEW6 270 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Cyb561Q60720 250 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Arfrp1Q8BXL7 201 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 CmblQ8R1G2 245 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Trappc6bQ9D289 158 aa13.84□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm13083A2AGW5 501 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Gm5901D3YVJ1 333 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Prr23a1G3UW32 258 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Smim22J3QP37 91 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Cd8bP10300 213 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Dusp1P28563 367 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Bdkrb2P32299 392 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 SelenopP70274 380 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Smn1P97801 288 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Lgals3bpQ07797 577 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Nxt2Q3UNA4 142 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 NmsQ5H8A1 153 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Nol4lQ6DIB4 494 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 March11Q8CBH7 400 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Olfr734Q8VFT4 313 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 2610524H06RikQ9CZU9 139 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Rtl8bQ9D1F0 113 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Mfsd4b2Q9D8I5 366 aa13.83□□□□□ -0.19
Trim39-203ENSMUST00000113706 Muc5acE9QAQ8 3455 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Cnot1Q6ZQ08 2375 aaKnown RBP13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr225E9PWF9 419 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Tmem44E9Q4M0 433 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Foxg1Q60987 481 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Zfp52Q8BJ45 724 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Tmed4Q8R1V4 227 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 SptssaQ8R207 71 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Ca15Q99N23 324 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Pip4p2Q9CZX7 257 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 9330161L09RikQ9D253 136 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Zfpl1Q9DB43 310 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Zfp616J3QN14 987 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr895L7N210 316 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Zfp955bL7N232 545 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 CfdP03953 259 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 MpzP27573 248 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 SgcbP82349 320 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Slc25a26Q5U680 274 aa13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Thoc7Q7TMY4 204 aaKnown RBP13.83□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr1438-ps1A0A140LHS9 319 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 C2cd6E9Q152 557 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm3727J3QM54 205 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm21767J3QPV5 180 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Itga5P11688 1053 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Hoxb1P17919 297 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Bcl2l2P70345 193 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 TefmQ5SSK3 364 aaKnown RBP13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Nxph2Q61199 261 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr796Q8VGJ1 310 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Dram2Q9CR48 267 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Eif2s3yQ9Z0N2 472 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 OpcmlG5E8G3 345 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm8356J3QPD3 205 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 CebpbP28033 296 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Foxa3P35584 353 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Yes1Q04736 541 aaKnown RBP13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Spata22Q5SV06 358 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Mapk3Q63844 380 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Pou4f3Q63955 338 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Ube2j2Q6P073 259 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Iqcf4Q6P8Y2 204 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Fcrl1Q8R4Y0 343 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 CsprsQ99388 208 aa13.82□□□□□ -0.2
Trim39-203ENSMUST00000113706 Speer4eK7N6S8 255 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Igsf6P0C6B7 237 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 NfyaP23708 346 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Nat2P50295 290 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Psg26Q4KL65 475 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Zfp729aQ4QQP3 973 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Ltc4sQ60860 150 aa13.81□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr1087Q7TR63 313 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms