RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tmem216Q9CQC4 141 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Utp23Q9CX11 249 aaKnown RBP16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 CutcQ9D8X1 272 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Znf593Q9DB42 134 aaKnown RBP16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Hebp2Q9WU63 205 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Trbv15A0A0A6YYE3 115 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ankrd29D3YVV3 309 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Dusp1P28563 367 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Atp4bP50992 294 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Cyb5aP56395 134 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Kcng3P59053 433 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rab3cP62823 227 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm773Q3TML4 206 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Irgm1Q60766 409 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gnb3Q61011 340 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 BC061237Q6P8I2 184 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr775Q7TRI4 312 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Pars2Q8CFI5 475 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 PipoxQ9D826 390 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 1700069L16RikQ9D9H5 109 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Wwtr1Q9EPK5 395 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Mnx1Q9QZW9 404 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Trip12G5E870 2025 aaKnown RBP16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Pusl1A2ADA5 291 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm21783J3QM57 227 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 AipO08915 330 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ca6P18761 317 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 AvpP35455 168 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Klk1b26P36369 261 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tmem69Q3KQJ0 245 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Q3TTL0 348 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 TrmoQ562D6 431 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Cbx5Q61686 191 aaKnown RBP16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 OmgQ63912 440 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 St8sia1Q64687 355 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 RhbgQ8BUX5 455 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 March11Q8CBH7 400 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 C1ql2Q8CFR0 287 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rbm48Q8K2X2 371 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1447Q8VFX3 309 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Pop4Q9CR08 221 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 RetnlaQ9EP95 111 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 SclyQ9JLI6 432 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Prg4Q9JM99 1054 aa16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 TsnaxQ9QZE7 290 aaKnown RBP16.49■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm438B1ASB3 393 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Mmp27D3YV89 551 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr613E9PYB4 317 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fam98cE9PYD1 344 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm8020F6WLE9 229 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 BC117090L7N257 96 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Itga5P11688 1053 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 CtsaP16675 474 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Sdc1P18828 311 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rps2P25444 293 aaKnown RBP16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fkbp2P45878 140 aaKnown RBP16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Grb2Q60631 217 aaKnown RBP16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1173Q7TR24 312 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1014Q7TR95 305 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1013Q7TR96 305 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr536Q8VFE9 307 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rnf141Q99MB7 230 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Iqcf5Q9DAL7 148 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr716Q9EPG6 314 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm12355A2A4X6 163 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm14409A2ARR8 349 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Spink14B9EJP9 96 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fam53aE9PV82 402 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Sult2a5K7N6K9 285 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 DffbO54788 344 aaKnown RBP16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 SgceO70258 437 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Mbl2P41317 244 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Srsf3P84104 164 aaKnown RBP16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Prr27Q3SYJ2 352 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Zfp36l3Q5ISE2 725 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 TecrlQ8BFZ1 361 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rrnad1Q8BZG5 475 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Dtx2Q8R3P2 619 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Yif1aQ91XB7 293 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Zdhhc4Q9D6H5 343 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 GlceQ9EPS3 618 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Neu3Q9JMH7 418 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Cx3cr1Q9Z0D9 354 aa16.48■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm2035J3QP87 144 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 XylbQ3TNA1 551 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fndc4Q3TR08 231 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm1673Q3UR78 90 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Slc38a11Q3USY0 453 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Elavl2Q60899 360 aaKnown RBP16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 AI987944Q7TPX5 406 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 9930022D16RikQ8BG27 128 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 TxnipQ8BG60 397 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Faap24Q8BHL6 221 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gtdc1Q8BW56 445 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 MetrnQ8C1Q4 291 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 PurgQ8R4E6 350 aaKnown RBP16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1309Q8VF83 320 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Plekhf2Q91WB4 249 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tmem175Q9CXY1 499 aa16.47■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Cpn1Q9JJN5 457 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms