RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 FAHD2BQ6P2I3 314 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-234ENST00000642041 TMEM108Q6UXF1 575 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 RFPL4BQ6ZWI9 263 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 HOGA1Q86XE5 327 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 ZDHHC22Q8N966 263 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 SLC25A40Q8TBP6 338 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 KLF14Q8TD94 323 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-234ENST00000642041 ST8SIA4Q92187 359 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 HPS1Q92902 700 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 SNAPC3Q92966 411 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 FAHD2AQ96GK7 314 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 MARS2Q96GW9 593 aaKnown RBP14.64□□□□□ -0.07
PHGDH-234ENST00000642041 C20orf85Q9H1P6 137 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 BANF2Q9H503 90 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 NUDT15Q9NV35 164 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 MGAT4AQ9UM21 535 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 ST3GAL6Q9Y274 331 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 PDCD6O75340 191 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 MT-ND4P03905 459 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 OR3A3P47888 321 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 UBE2MP61081 183 aaKnown RBP14.63□□□□□ -0.07
PHGDH-234ENST00000642041 RRAS2P62070 204 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-234ENST00000642041 NAAAQ02083 359 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 PLA2G7Q13093 441 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 HLXQ14774 488 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-234ENST00000642041 CRIP3Q6Q6R5 217 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 SLC25A26Q70HW3 274 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 OR5D18Q8NGL1 313 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 OR4C16Q8NGL9 310 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 UPRTQ96BW1 309 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 RADILQ96JH8 1075 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 DHRS9Q9BPW9 319 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 PECRQ9BY49 303 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 OR2J1Q9GZK6 312 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 MED28Q9H204 178 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 IFT22Q9H7X7 185 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 ETAA1Q9NY74 926 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 PURGQ9UJV8 347 aaKnown RBP14.63□□□□□ -0.07
PHGDH-234ENST00000642041 ZNF221Q9UK13 617 aa14.63□□□□□ -0.07
PHGDH-234ENST00000642041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.63□□□□□ -0.073e-11■□□□□ 8.5
PHGDH-234ENST00000642041 IGHV2OR16-5A0A0B4J2B6 119 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 SOCS1O15524 211 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 DSCAMO60469 2012 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 NOS1APO75052 506 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 GNB3P16520 340 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 RBM11P57052 281 aaKnown RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 TAS2R31P59538 309 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 SURF2Q15527 256 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 OR8G1Q15617 311 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 MOGAT2Q3SYC2 334 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 RNASE12Q5GAN4 147 aaKnown RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 SFRP4Q6FHJ7 346 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 OR2T2Q6IF00 324 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 C1QL2Q7Z5L3 287 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 BPIFB2Q8N4F0 458 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 OR4K15Q8NH41 348 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 S100PBPQ96BU1 408 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 ARHGAP5-AS1Q96IT6 56 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 DIRC2Q96SL1 478 aa14.62□□□□□ -0.07
PHGDH-234ENST00000642041 SEBOXQ9HB31 216 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 MYEF2Q9P2K5 600 aaKnown RBP14.62□□□□□ -0.07
PHGDH-234ENST00000642041 IGKV1-27A0A075B6S5 117 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 IGHV1-18A0A0C4DH31 117 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 A0A1B0GWJ7 208 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 CREBL2O60519 120 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-234ENST00000642041 CD3DP04234 171 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 CTXN2P0C2S0 81 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 ANOS1P23352 680 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 GPM6AP51674 278 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 PSG7Q13046 419 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 Q6ZS49 121 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 NUP37Q8NFH4 326 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 CCL19Q99731 98 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 CMSS1Q9BQ75 279 aaKnown RBP14.61□□□□□ -0.07
PHGDH-234ENST00000642041 GSX2Q9BZM3 304 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 OR51I2Q9H344 312 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 TREM2Q9NZC2 230 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 ALG5Q9Y673 324 aa14.61□□□□□ -0.07
PHGDH-234ENST00000642041 SPRY1O43609 319 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-234ENST00000642041 TIMM8AO60220 97 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-234ENST00000642041 IGHV3-13P01766 116 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 AMY2AP04746 511 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 ZNF250P15622 560 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 CHATP28329 748 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 MDH2P40926 338 aaKnown RBP14.6□□□□□ -0.07
PHGDH-234ENST00000642041 MAB21L1Q13394 359 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 KRTAP24-1Q3LI83 254 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 PLAC9Q5JTB6 97 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 SPIN3Q5JUX0 258 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 FBXL14Q8N1E6 418 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 OR5H2Q8NGV7 314 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 HPSE2Q8WWQ2 592 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 ERGIC1Q969X5 290 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 GINS4Q9BRT9 223 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 NICN1Q9BSH3 213 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 ADAT1Q9BUB4 502 aaKnown RBP14.6□□□□□ -0.07
PHGDH-234ENST00000642041 OR51J1Q9H342 316 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 RASL12Q9NYN1 266 aa14.6□□□□□ -0.07
PHGDH-234ENST00000642041 FBXO9Q9UK97 447 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-234ENST00000642041 KCNK7Q9Y2U2 307 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms