RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 OR4C45A6NMZ5 311 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 G3V4G9 280 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 OR2H2O95918 312 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 CCR9P51686 369 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 P2RX3P56373 397 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 SLC34A1Q06495 639 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 ALKBH1Q13686 389 aaKnown RBP11.2□□□□□ -0.62
LINC00339-211ENST00000641009 SPIN3Q5JUX0 258 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 Q6ZS46 218 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 LHFPL3Q86UP9 236 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 Q8N2B8 174 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 CBR4Q8N4T8 237 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 OR13C9Q8NGT0 318 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 CLEC7AQ9BXN2 247 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
LINC00339-211ENST00000641009 GLS2Q9UI32 602 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
LINC00339-211ENST00000641009 EXOGQ9Y2C4 368 aaKnown RBP11.2□□□□□ -0.62
LINC00339-211ENST00000641009 FAM172BPA6NC97 362 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 F2RL2O00254 374 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 SH2D1BO14796 132 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 OPN1MWP04001 364 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 OPN1MW2P0DN77 364 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 OPN1MW3P0DN78 364 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 CD28P10747 220 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 DBTP11182 482 aaKnown RBP11.19□□□□□ -0.62
LINC00339-211ENST00000641009 GABRB1P18505 474 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 ERP29P30040 261 aaKnown RBP11.19□□□□□ -0.62
LINC00339-211ENST00000641009 DYNLT3P51808 116 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 PRAMEF5Q5TYX0 476 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 DTX3Q8N9I9 347 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 OR5M11Q96RB7 305 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 ISG20L2Q9H9L3 353 aaKnown RBP11.19□□□□□ -0.62
LINC00339-211ENST00000641009 NEK6Q9HC98 313 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 MYRFQ9Y2G1 1151 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 UBE2J1Q9Y385 318 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-211ENST00000641009 GMPPBQ9Y5P6 360 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 SNTNA6NMZ2 147 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 FBXO24O75426 580 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 KDM4BO94953 1096 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 MT-ND2P03891 347 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 GLIPR1P48060 266 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 BLCAPP62952 87 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 SCN1BQ07699 218 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 AESQ08117 197 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 GALEQ14376 348 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 ZFP1Q6P2D0 407 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 OR4P4Q8NGL7 312 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 ZCCHC4Q9H5U6 513 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 AMBNQ9NP70 447 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 ING3Q9NXR8 418 aa11.19□□□□□ -0.62
LINC00339-211ENST00000641009 DNAH3Q8TD57 4116 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 TRGV10A0A0A0MS01 117 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 E9PI62 339 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 ZNF44P15621 663 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 CDK2P24941 298 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 HTR1DP28221 377 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 GDNFP39905 211 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 ARSJQ5FYB0 599 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-211ENST00000641009 ZBTB49Q6ZSB9 765 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 PDCD1LG2Q9BQ51 273 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 ZNF649Q9BS31 505 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 COMMD4Q9H0A8 199 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 GAL3ST2Q9H3Q3 398 aa11.18□□□□□ -0.62
LINC00339-211ENST00000641009 A0A0G2JK05 382 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 ZFPL1O95159 310 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 HCKP08631 526 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 TMEM225BP0DP42 221 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 CD24P25063 80 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 LMO1P25800 156 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 KISS1Q15726 138 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 Q6P435 159 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 SAXO1Q8IYX7 474 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 SYS1Q8N2H4 156 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-211ENST00000641009 MRPL48Q96GC5 212 aaKnown RBP11.17□□□□□ -0.62
LINC00339-211ENST00000641009 COQ2Q96H96 371 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 SLC29A1Q99808 456 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-211ENST00000641009 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 PCDHGB5Q9Y5G0 923 aa11.17□□□□□ -0.62
LINC00339-211ENST00000641009 ODAMA1E959 279 aa11.16□□□□□ -0.62
LINC00339-211ENST00000641009 FAM90A22PA8MWA6 464 aa11.16□□□□□ -0.62
LINC00339-211ENST00000641009 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-211ENST00000641009 SULT1B1O43704 296 aa11.16□□□□□ -0.62
LINC00339-211ENST00000641009 PEX14O75381 377 aa11.16□□□□□ -0.62
LINC00339-211ENST00000641009 FADS2O95864 444 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms