RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MAS1P04201 325 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 OR3A1P47881 315 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 MTNR1BP49286 362 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 ERVFRD-1P60508 538 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 RPL31P62899 125 aaKnown RBP21.9■■□□□ 1.1
VEGFA-231ENST00000640499 ZNF273Q14593 569 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 C1orf122Q6ZSJ8 110 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 TCF23Q7RTU1 214 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 FAM185AQ8N0U4 392 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 YTHDF1Q9BYJ9 559 aaKnown RBP21.9■■□□□ 1.1
VEGFA-231ENST00000640499 ESM1Q9NQ30 184 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 SIRT7Q9NRC8 400 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 DNHD1Q96M86 4753 aa21.9■■□□□ 1.1
VEGFA-231ENST00000640499 COL6A5A8TX70 2615 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 A0A1W2PQ09 198 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 SIRPB1O00241 398 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 DLX6P56179 175 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 SSX1Q16384 188 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 KRTAP24-1Q3LI83 254 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 FIP1L1Q6UN15 594 aaKnown RBP21.89■■□□□ 1.09
VEGFA-231ENST00000640499 USP43Q70EL4 1123 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 CEACAM19Q7Z692 300 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 LRRTM1Q86UE6 522 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 SPARTQ8N0X7 666 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 OR51T1Q8NGJ9 327 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 CPNE2Q96FN4 548 aaPredicted RBP21.89■■□□□ 1.09
VEGFA-231ENST00000640499 FAM192AQ9GZU8 254 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 EXOSC4Q9NPD3 245 aaKnown RBP21.89■■□□□ 1.09
VEGFA-231ENST00000640499 IL36GQ9NZH8 169 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 ZNF581Q9P0T4 197 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 ING4Q9UNL4 249 aa21.89■■□□□ 1.09
VEGFA-231ENST00000640499 A0A0G2JK05 382 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 RNASEK-C17orf49H0YIS7 233 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 M0R1W7 72 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 SH2D1BO14796 132 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 RRP9O43818 475 aaKnown RBP21.88■■□□□ 1.09
VEGFA-231ENST00000640499 MRPS14O60783 128 aaKnown RBP21.88■■□□□ 1.09
VEGFA-231ENST00000640499 CCL3L1P16619 93 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 FPR2P25090 351 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 SCGB2A2Q13296 93 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 HCP5Q6MZN7 132 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 ZNF367Q7RTV3 350 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 PDZD9Q8IXQ8 264 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 BPIFB2Q8N4F0 458 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 SIGLECL1Q8N7X8 197 aa21.88■■□□□ 1.09
VEGFA-231ENST00000640499 C1orf147Q96MC9 270 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-231ENST00000640499 MS4A7Q9GZW8 240 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-231ENST00000640499 UNKLQ9H9P5 680 aaKnown RBP21.88■■□□□ 1.09
VEGFA-231ENST00000640499 IGHV1-69DA0A0B4J2H0 117 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 MDFIC2A0A1B0GVS7 189 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 A0A1W2PP11 408 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 MEX3AA1L020 520 aaKnown RBP21.87■■□□□ 1.09
VEGFA-231ENST00000640499 IGHV1-69P01742 117 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 UCHL1P09936 223 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 GABRR1P24046 479 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 MAPK3P27361 379 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-231ENST00000640499 HILS1P60008 231 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 RSU1Q15404 277 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 PIGYQ3MUY2 71 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 GPR157Q5UAW9 335 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 TPRX1Q8N7U7 411 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 ZDHHC22Q8N966 263 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 OR4D6Q8NGJ1 314 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 THRSPQ92748 146 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 MUL1Q969V5 352 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 LRRC42Q9Y546 428 aa21.87■■□□□ 1.09
VEGFA-231ENST00000640499 A0A0A6YYJ9 748 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 SLC33A1O00400 549 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-231ENST00000640499 HTR3BO95264 441 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 FABP5Q01469 135 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 SCN1BQ07699 218 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 KLRD1Q13241 179 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 GRK1Q15835 563 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 METAP1DQ6UB28 335 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-231ENST00000640499 GDPD3Q7L5L3 318 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 CDH26Q8IXH8 852 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 CMTM4Q8IZR5 234 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 PIP4P2Q8N4L2 257 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 OR5D13Q8NGL4 314 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 ZNF418Q8TF45 676 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-231ENST00000640499 NR1H4Q96RI1 486 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-231ENST00000640499 SUCNR1Q9BXA5 334 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 METTL9Q9H1A3 318 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 GLS2Q9UI32 602 aa21.86■■□□□ 1.09
VEGFA-231ENST00000640499 TRAV24A0A0B4J272 114 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 CD37P11049 281 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 PRTN3P24158 256 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 BMXP51813 675 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 EDDM3AQ14507 147 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 JAGN1Q8N5M9 183 aa21.85■■□□□ 1.09
VEGFA-231ENST00000640499 MGST3O14880 152 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 DEGS1O15121 323 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 ZNF44P15621 663 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 SRMP19623 302 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 EDDM3BP56851 147 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 DEFB112Q30KQ8 113 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 UBE2UQ5VVX9 321 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 PNKDQ8N490 385 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 PHYHIPQ92561 330 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 GFI1Q99684 422 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms